Dendrobium catenatum: 110115350
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Entry
110115350 CDS
T05027
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110115350
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110115350
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110115350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
DEXQc_Suv3
ResIII
Helicase_C
AAA_22
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
110115350
NCBI-ProteinID:
XP_020704224
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MLSHASPACYSSLSVSRLFLPPTPFRSNCSRALVDRRNGRRSVLAKPRLFVALFSLRPSS
PARKKRFSESDPEDEDELDEDEEDDEDVAAEEYVDGVLASGDVSEDEGEYAVSEGEEVEV
QPSAVSSPQYKDHKWQRVERLIAEVREFGEEIIDFEELAGIYDFPIDKFQRLAIQAFLRG
SSVVVSAPTSSGKTLIAEASAIATVAKGRRLFYTTPLKALSNQKYREFRKSFGEHRVGLL
TGDSAINKDASILIMTTEILRNMMYQSVGMVSSGSKLFDVDVVVLDEVHYLSDISRGTVW
EEIVIYCPKEVQLICLSATVANPDELAGWIGKIHGKTELVASTKRPVPLQWHFSLKTSLL
PLLDEKGTKINRKLSIDNVHPSPSKVDTYNENRTRKHRSNKTEQSFSRVAGISRKTPLSK
NVINNIRRSQVPQIRDTLKHLRVKDMLPAIWFIFSRRGCDAAVQYLEDCMLLDDCEASEV
ELELRRFRVQYPDAIREGAIKGLLQGIAAHHAGCLPLWKSFVEELFQRGLVKVVFATETL
AAGINMPARTAIISSLIKRGESGRTLLSSNELLQMAGRAGRRGIDEVGYVVLVQTPYEGA
EESCELLFTGLEPLVSQFTASYGMVLNLLAGEKVTRMSSKSANLKTSSSGRTLEEARKLV
EQSFGNYVGSNVMLAAKEELIRIRKEIELLSKEVTDEAIDRKCQEQLLEAEYAEILYLQE
ELRVEKQFRTELRQKMELKRMAAWKPLLDELETGQLPFICLQYKDSESVQHLVSGVYMGK
FHLDPENSNIDPSKPKLAYAEDEGSGKPAYYVALGSDNSWYLFTEKWIKMIYKIGLPNVS
LAYGEALPREILRGLLTKEELTWDKLVESEFGSLWSTEGSLETWSWSLNVPVLSSLSEDD
EVKNWSEEYQDAINCYREQRKKVSRLKKKMTSTKGFKEFKRVLDVVNFNKEKIERLETRS
HRLTRRIEQIEPSGWKEFLQISKVIQETRALDVHTHVMYPLGETASAIRGENELWLAMVL
RNKILLDLKPAQLAAVLGSLVSEGIKIRPWKSNCYVFEPSSIVVDVVEILEEQKTSLLQI
QDKYGVKISCGLDCQFSGMVEAWASGLTWREIMMDCAMDEGDLARLFRRTIDLLAQIPKL
PDIDPVVQNNALAAANVMDRAPISELAG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcacacgcctcgcctgcttgctactcttctctctctgtttcgcgtctcttcctc
cctcccacccctttccgcagcaactgctcccgggccctagtggaccgccgcaacggacga
agatcggttctcgcgaaacctcgtctcttcgtcgctctcttctcactccgcccctcctcg
ccagcgaggaagaagaggttctctgagtctgacccagaagacgaggatgagttggacgag
gatgaagaagacgatgaagatgtcgccgcggaggagtatgttgacggggttttagcgtct
ggggatgtttctgaagatgagggtgagtatgcagtgagcgaaggagaggaggtggaggtg
cagccctcggctgtgtcctcgcctcagtacaaggatcataagtggcagagggtggagagg
cttatcgcagaggttcgggagtttggggaggagattattgattttgaggagcttgcaggc
atctatgatttccccattgataaattccagaggttggctatacaagcatttttaaggggt
tcatcagttgtagtttctgcaccaactagtagtgggaagacattaattgcagaagcttct
gcaatagctactgttgccaaaggaagacgactcttctacacaacccccttgaaggctttg
tctaatcaaaaatatcgggaattcaggaaatcatttggtgagcacagagttggtcttttg
actggagattctgctattaacaaagatgcatcaatattaattatgacgactgagatactt
cgcaacatgatgtaccaaagtgttggtatggtatcttcagggagtaagttgttcgatgtg
gacgtggttgttcttgatgaggtgcattatcttagcgacatatcacgtggtactgtttgg
gaagagattgtcatatactgtccaaaggaagtccaacttatatgtctctcagcaactgtt
gcaaatcctgatgagctagctggttggatagggaagattcatggcaaaacagaactggtg
gcttccacaaaaaggccagttccactacaatggcacttctctttaaagacatctctgcta
ccacttctggatgagaaaggcacaaaaatcaataggaagctttcaattgataacgtgcat
ccatcaccctcaaaggtcgatacttacaatgagaacagaacaagaaagcatagatcgaac
aaaactgaacaaagctttagtagggttgccgggatctcaagaaaaacacctttgtcaaag
aatgtcataaacaacatacgtcgctcacaagttcctcaaatcagggataccttgaagcac
cttagggtgaaggatatgctgccagctatttggtttatttttagtagaagaggttgtgat
gctgctgttcagtaccttgaggattgcatgcttttagatgactgtgaagctagcgaagtt
gaacttgaactgcggagatttagggtgcagtatcctgatgctattagggaaggagctata
aaaggtcttctgcaaggaattgcagcacatcatgcgggctgcttaccactttggaagtca
tttgttgaggaactatttcaaagaggtcttgtcaaggttgtctttgctaccgaaacactt
gctgctgggatcaatatgcctgctaggacagcaataatttcatctcttatcaaaaggggt
gaatcaggacggacacttttaagctcaaatgagctacttcagatggcaggtcgtgctgga
aggagaggtattgatgaagttggttatgttgttcttgttcaaactccatatgaaggagct
gaagaatcttgtgagcttctgttcacagggcttgaacctcttgtatcacaatttactgct
tcttatggaatggttcttaatctcctagctggtgaaaaagttactcgcatgtcaagcaaa
tcggctaatttaaaaacttctagttccggtaggacattagaagaagctaggaaactggtt
gaacaaagttttggtaactatgttggaagtaatgtcatgcttgctgctaaagaagaacta
ataaggatcaggaaagaaattgagttgctttcaaaggaagttactgatgaagctattgac
agaaagtgccaagagcaactcttggaggcagaatacgctgaaatcttatatttacaggaa
gaactgagggtagagaaacagtttcgaactgaactcagacaaaagatggagcttaagcgc
atggctgcatggaaaccattattggatgaacttgaaactggacaactgcctttcatttgt
ctgcaatataaagacagcgaatcagttcagcatcttgtctctggtgtttatatgggaaag
tttcatctagatcctgagaattctaacattgacccgtccaagcctaagttggcatatgcg
gaagacgagggtagcggcaagccagcctattatgtagctttgggctcagacaattcttgg
tatctatttacagaaaagtggatcaaaatgatatacaagattggccttcctaatgtctct
ttagcttatggtgaagctttaccgagagaaattttgaggggcctcctaacgaaggaggag
ttgacgtgggataagctagtagaatctgagtttggatctctatggagcacagaaggttct
cttgagacatggtcatggagtctaaatgttccagtactgagtagcctctcagaagatgat
gaggtgaaaaattggtctgaagaatatcaagatgctatcaactgttatagagagcaaaga
aaaaaggtttcccgtttgaagaaaaaaatgacaagcacaaaggggtttaaagaatttaaa
agggttttggatgtggttaactttaacaaggaaaaaattgagcgcttagaaactagatct
catcgtttaaccagaaggatagaacagattgaaccctctggttggaaagagtttcttcag
atcagcaaagttatacaagaaaccagagctttagatgtccatacacatgttatgtatcct
ttgggagaaacagcgtctgcaattcgaggagaaaatgaactttggctcgctatggtcctt
agaaataaaattttgttagatctaaaacctgctcaacttgctgcagtacttggaagttta
gtttctgaaggaataaaaattcggccttggaaaagtaactgctacgtatttgaaccatcc
tccattgttgttgatgttgttgagattttggaggaacagaaaacctctctcttgcagata
caggataagtatggggtaaagatttcttgtggattagattgccaattttctgggatggtt
gaggcttgggcttctggtctgacttggagggaaataatgatggactgtgcaatggatgag
ggtgatttggctcggctcttccgtcgtacaattgatttattggcacagattccaaaactg
ccggacattgatcccgtggtgcaaaacaatgctctcgcagccgctaatgttatggaccgt
gcgccgatcagcgagttagctggatga
DBGET
integrated database retrieval system
