Dendrobium catenatum: 110115740
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Entry
110115740 CDS
T05027
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dct
Dendrobium catenatum
Pathway
dct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110115740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110115740
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110115740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
FAM60A
Motif
Other DBs
NCBI-GeneID:
110115740
NCBI-ProteinID:
XP_020704744
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MYPSRFKRMKFDPEIMDFSDPFAIARYIDELNEERYGSITKEYEEIHALRMKFINLLPPY
LIKPCSKSEPQPLQTSLTANGQPSGLFQKVDLTQHGRISSAGDVIDVDSDSDADGVNPTF
TQSYQYEKQFYTPVVVRQPPSIQYEKVSFGEKVDVQVNKSPKSELLTFKGSDDLASLLSK
MKKEKKMKTDKKEGKEKKEKKERKVKKEKILHASTSPPIPLLSNEEHSPQMLQQSQDDVE
ATESDGLEDLWNDMSLAIECSKDVEPSAPVEKEEVEKEEECCHSFILKDDLGIVCRVCGV
VQRSIETIFDFQWTKNTRDARHYVSGTRKHEDMDEAVDASHPKYSEEDAAIDLGIDPRHK
KLMKPHQIEGFRFLVKNLMVEKPGGCILAHAPGSGKTFMLISFMQSFITQKPDKRPLVVL
PKGILSTWKREFQQWQLEDIPLFDFYSSKADHRPQQLEILKSWEQSRGILFLGYKQFTNI
VSSTSTEKIDALCREKLLMVPGLLILDEGHTPRNNNTAIVHSLSRIKTPRKVVLSGTLFQ
NHVKEVFNILKLVRPKFMKEESSRNVMKRILSSVEISAGRRPNKGCKESAFCDLVHETLQ
NDDNSLRKNSVIKDLREMTHSVLHYYKGDFLDELPGMVDFTVFLKLTSKQKSIASRLHKL
DIFKGNSVGSAVYMHPNLKEVAESVDGDKTESLSNDKVDGLIGSLNVRDGVKTKFFLGVL
SLSESAGEKLLVFSQYILPLKFLERLVIQRKGWRLGKEVFMISGDSNPEDREWSMEQFNN
SADARVLFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIGRAFRPGQRKKVYTYRLV
AADSPEEEHHNTSFKKELISKLWFECNEYSGQQEIDLHEVELTDCDDIFLESPALIEDIK
CLYKR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgtatccttctagatttaaaagaatgaagttcgatccagaaatcatggatttctccgac
ccctttgcaatagccagatatattgatgagttgaatgaggagaggtatgggagtatcact
aaagaatatgaagaaattcatgctttgaggatgaagtttataaatcttttacctccctat
cttatcaagccttgttctaagtcagagcctcagccattgcaaacctcccttactgctaat
ggtcagccatctggtttattccaaaaagtagatttgacacagcatggtagaatatcatcg
gcgggggatgtcattgatgtggatagcgattctgatgccgatggtgtgaatcctaccttc
acccagtcttatcaatatgagaagcagttttatacgccagtcgttgtaaggcagccgcct
tctattcagtatgagaaggtttcttttggagaaaaagttgacgtccaggtcaacaaaagt
cctaagagcgaacttctcacattcaaaggtagtgatgatctagcatctcttctaagtaaa
atgaaaaaggagaaaaagatgaaaacagataaaaaagaaggaaaagagaaaaaagagaaa
aaagagagaaaggttaaaaaggagaaaatactccatgctagtacttcaccaccaattcct
ttgctgagcaatgaggaacattcaccacaaatgttgcagcagagtcaagatgatgtagaa
gcaacagaaagtgatggtttagaagatctttggaatgatatgtctctggctattgaatgt
tcgaaggatgttgaaccttcagctccggttgagaaggaagaggtcgagaaggaagaggaa
tgctgtcattccttcatcctcaaggacgacttgggaattgtttgtcgagtatgtggagtt
gttcaaaggagcatcgagacgatttttgatttccaatggacaaagaacacccgcgatgcg
aggcactatgtgtctggaactcgtaagcatgaggatatggatgaagctgttgatgcatct
cacccaaagtattctgaagaagatgctgcaattgatcttggcattgatccgaggcataag
aagttgatgaagccacatcaaatagagggcttcagattccttgtaaaaaatcttatggta
gaaaagccaggtggatgcatccttgctcatgccccaggatccggaaaaacatttatgctt
ataagctttatgcagagctttatcactcagaaacctgacaaaagaccattggtggttctt
cctaaggggatcttgagcacgtggaagagagagttccagcaatggcaattggaagacatt
cccttgtttgatttctattcctctaaggcagatcatagaccacaacagctggagattttg
aagagctgggaacaaagtagaggcattttatttttgggctataaacagttcaccaacatt
gtcagcagcacatccactgaaaagattgatgctttatgtcgagaaaaactactaatggtt
cccggccttctaattctagatgaaggtcataccccaagaaataacaacactgctattgtg
cattcactttcaagaattaagacacctcggaaggtagtactttccggcacactattccaa
aatcatgtaaaggaagtcttcaatattctcaaactagtacgacctaaattcatgaaggag
gagtcctcccggaatgtcatgaagcgcatccttagcagtgtagagatatcagctggtagg
cggccaaataaaggttgcaaggagtctgctttctgtgatcttgttcacgaaacccttcaa
aatgatgataatagcttaaggaaaaattcagtaattaaggacctgagagaaatgacgcac
agtgttcttcactactacaaaggtgatttcttggatgaacttcctggcatggttgacttc
accgtgttcttgaagctaacttcaaagcaaaaaagtattgccagtaggttgcacaaactt
gatatattcaagggaaactctgtggggagtgctgtatatatgcatccaaacctgaaggaa
gttgccgaaagtgttgatggggataaaactgagtccttaagtaatgataaagttgatggt
ttaattggatcattaaatgtcagggatggagtgaaaaccaagttttttcttggcgttctt
tctttgtctgaatctgctggagagaaactccttgtatttagccagtacatccttcctctg
aagttcttggaaaggttggtcattcaaaggaagggctggcgcttggggaaagaagttttt
atgatatctggtgattcaaatccagaagatagggagtggtctatggagcaattcaacaat
tctgcagatgccagagttctttttggttctataaaggcatgcggagagggtatttcttta
gttggagcatctaggatattgatcttagatgtccatctcaatccttctgtcactcgtcag
gcaattggtcgagcttttcggcctggccaacggaagaaggtatacacctacaggcttgtt
gctgcagatagtccagaggaagaacaccataatacctccttcaaaaaggagcttatttca
aagctctggtttgagtgcaacgagtacagtggccaacaggagattgatcttcacgaggtt
gaacttacagattgtgatgatatcttccttgaaagtcctgctttgattgaagatatcaag
tgcctgtacaaaaggtga
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