Dendrobium catenatum: 110116560
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Entry
110116560 CDS
T05027
Name
(RefSeq) exosome complex component CSL4 isoform X2
KO
K07573
exosome complex component CSL4
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110116560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110116560
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110116560
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110116560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
CHASE5
Motif
Other DBs
NCBI-GeneID:
110116560
NCBI-ProteinID:
XP_020705861
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MSAGEENIATPGEILGDSSQFIAGKGTYLAPNGRNIHASLTGQRRLVPPPPDSAEKRLTV
EVVGHKTRGAVPEPGVVVIARVTRVMARMASADIMCVESKAVKEKFTGIIRQQDVRATEI
DKVDMYQSFRPGDIVKAEVLSLGDARAYYLSTAKNELGVVSAQSIAGATMVPISWTDMQC
PSTGQVEKRKVAKVL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggagaagaaaatatcgcaactccaggcgaaatactgggagattcgtcccag
tttatcgcagggaaagggacctatctggcacctaatggccggaatattcacgcttccctg
accggccaacgtcgtttagtaccccctccacccgactccgccgagaagaggttgaccgtg
gaagttgttggtcacaagacgcgcggtgctgttccggaaccgggagttgtcgtcattgct
cgagtgactagggtaatggctagaatggcatcagctgatataatgtgtgttgaatcaaag
gctgttaaggaaaagtttaccggcattattaggcagcaagatgtcagggcaactgaaatt
gataaagttgatatgtaccagtcttttcggccaggtgacattgttaaagctgaagttctt
tctctcggagatgcaagggcttattacctttctactgcaaaaaatgaactaggagttgtt
tctgctcagagcatagcaggagctaccatggtaccaatcagttggacagatatgcaatgc
ccgtcaactggtcaggttgaaaagagaaaagttgcaaaagtgctttag
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integrated database retrieval system
