Dendrobium catenatum: 110116561
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Entry
110116561 CDS
T05027
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110116561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110116561
Spliceosome [BR:
dct03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110116561
Complex C
U4/U6.U5 tri-SnRNP related factors
110116561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
110116561
NCBI-ProteinID:
XP_020705858
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MEIQTSGKPIDTLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKTLWGWCDPYIK
DEEEFSPGSNGRTTTMGVYVRDLLLGQYYFDTLFPRVPVPVLRQITGNLEKLKLPTKHSG
VTGDSNRHGWDDTARRPPSVKAALSVSFGQRAPHRASTRDASPVRRTITPPRDKNHSTEP
RSSPGHRRSHSREGPDRHNSDRDRSHDRDRVRDRDRKHDYDGHSDRDLRGRDSYRSRYST
RDGGSTRDYERSGRDHDRHRRSRSSRSRSRSLDRHRSPLKDLSKDKAAPISSNLAKLKDL
YGDASDAKGNGTDYKFSKDTSSEEVIRLGGSTWR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggagattcaaacttctggaaaacccattgatactttactagagaaggtgctttgcatg
aacattctttcttctgattacttcaaagaactatataggttgaagacataccatgaggta
atcgatgagatctacaaccaagttgaccatgtggagccatggatgaccggaaattgtagg
ggtccgtcgacagcattttgcctcttatacaagttcttcactatgaagctcactgtcaag
caaatgcatggactattgaagcatcctgattctccatatataagagctattggttttcta
tacttgcgatatgttgccgatccaaagacattatggggatggtgtgatccttacataaaa
gatgaagaggaattttctcctgggtccaatgggcgaacgacaacaatgggggtatatgta
cgggatcttcttcttggacagtattattttgacacacttttccctcgggtaccagttcct
gtcctgcggcaaatcacaggcaatcttgagaaactcaagctaccaaccaagcactctggt
gtcactggggattccaatcgccatggctgggatgacactgctcgtcgcccaccttctgtg
aaagctgctctttctgtgtcatttggacaacgtgctccgcatcgcgcatccaccagggat
gcctcaccagttcggaggactattacaccacctagggacaaaaaccacagcacagaacca
aggtcatccccaggacatcgccgcagccatagtcgtgaagggcctgatcgtcacaattcc
gacagagatcgctctcatgaccgagaccgagttcgggatagggatagaaagcatgactat
gatggtcatagtgatcgggacctccgggggagggactcttacagatcgagatattctacg
agggatggtggtagcacaagggattatgaaaggagtggacgcgaccatgatcgccacaga
agatctcgatcgagcaggagcaggagccgtagcttagatcgtcatcgtagtcccctcaaa
gatttaagcaaggataaggctgctcccatctcaagcaatctggcgaagttgaaggatctg
tatggtgatgcaagtgacgccaagggaaatggtaccgactacaagttctcaaaggatacc
agttctgaagaggttattagattgggaggttcaacatggaggtag
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