Dendrobium catenatum: 114580464
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Entry
114580464 CDS
T05027
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Module
dct_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114580464
Enzymes [BR:
dct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114580464
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
114580464
NCBI-ProteinID:
XP_028553871
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MVAVIAGASPVYNVITYGARGDGKTDDTKAFLNAWKAACADPRNPYFVVTGKGGKNYLLS
KIIFEGPCSSSLKFLISGGLVAPNRLWTNQIDTWIVFKNIPKITVLGNGLIDGKGSIWWD
CLSKNQCRDAPYIMEFMGCDYLRVKNLNLKDSPGKHLVVYKSDYATLSGLKITSPEDSPN
TDGILISDSQHGTISYSTIGVGDDCIAIGPRSYDINVSHVTCGPGHGISIGSLGKNGVED
NVEGIRISNSHIFNTLTGIRIKTWQGGAGHAKSISYENINFTSVKAGVIVIDQYYCPELN
CPNKTGNVAISEVSYLGLQGSSVSDVAIKLACSSSMPCRDITMSEVSFTPQQANIRLQSY
CINAQGSASGFFFLVVGGEYELFAE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggttattgctggagcttccccagtttataatgtgattacatacggagcaaga
ggagatggcaaaacagatgacactaaggcttttttgaatgcgtggaaagctgcctgtgca
gatcctagaaatccatattttgttgtgacaggcaaaggaggaaagaactatttgctcagc
aaaataatatttgaagggccctgtagttccagcttgaagtttttgatcagtggaggtctt
gtggccccaaacagattgtggacaaatcaaatcgatacgtggatcgtattcaaaaacata
ccaaaaataactgtgctcggtaatggtttaatagatggcaaaggctccatatggtgggat
tgcttgtccaaaaatcaatgcagggatgcaccatatataatggagtttatgggatgtgat
tatcttagagttaagaatcttaacctaaaggacagccctggaaagcatttagtggtatac
aaaagcgattatgcaacgctgagtggtctcaaaatcacttctcctgaggactcgccaaat
actgatggaattcttatctctgattcccagcatggcaccatctcatactccacaattgga
gtaggagatgattgcatcgcaatcgggcctcgtagctatgatattaatgtgagccatgtt
acttgcgggcctggtcatggcataagcattggaagccttggaaaaaatggcgttgaagac
aatgttgagggaattcgtatctccaacagccacatttttaacacccttactggtatacgg
attaagacatggcagggtggggctggtcatgccaagtctatctcctatgagaacatcaac
ttcacttcagttaaagcaggcgttatagtcattgatcagtactactgccccgaactaaac
tgtccaaataagacgggaaatgtggcgataagcgaggtatcatatctgggtttgcaagga
agctcagtcagtgatgtggcaatcaaattggcttgcagctcgagcatgccgtgccgcgac
atcaccatgagtgaagtgagctttactcctcaacaagccaatattcgtctgcaatcttat
tgcatcaatgcacaaggaagtgcaagcggttttttttttcttgttgttggtggtgagtat
gagctgttcgcggaatga
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