Musicola paradisiaca: Dd703_0242
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Entry
Dd703_0242 CDS
T00927
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dda
Musicola paradisiaca
Pathway
dda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dd703_0242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dda03019
]
Dd703_0242
03400 DNA repair and recombination proteins [BR:
dda03400
]
Dd703_0242
Enzymes [BR:
dda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dd703_0242
Messenger RNA biogenesis [BR:
dda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dd703_0242
DNA repair and recombination proteins [BR:
dda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dd703_0242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACS84059
UniProt:
C6C7E1
LinkDB
All DBs
Position
273050..274873
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AA seq
607 aa
AA seq
DB search
MSTADVLNREALAAQILRETFGYQQFRPGQQAIIHAAVSGRDCLVIMPTGGGKSLCYQIP
ALVLDGLTLVVSPLISLMKDQVDQLQAYGVSAACLNSTQTREQQMAVIAGCRSGQIRLLY
IAPERLTNEGFLEQFTGWNPSLIAIDEAHCISQWGHDFRPEYRELGYIKQRFPQLPVVAL
TATADETTRNDIIRLLGLRDPLVQISSFDRPNIRYTLVEKFKPLDQLWLFVQGQRGKSGI
IYCNSRAKVEDISARLQNRGLSVGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPASAQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGENRQQPCGNCDICLDPPKRYDGLVDAQKAL
SCVYRAGQRFGMGYIAEVLRGANNQRIREFGHDKLPVYGIGKDKTQEQWISILRQLIHLG
LLTQNIIQHSALQLTESARPVLRGEVPLQLAVPRTINLKPRASQKSYGGNYDRKLFAKLR
KLRKSIADEDNIPPYVVFSDATLLEMAEVMPVTPGELLNINGVGQRKLERFGVPFMTLIR
EHLDNDE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcagacgtgttgaatcgggaagcgttagcggcgcaaatattgcgtgaaacc
ttcggttatcagcaatttaggccggggcaacaggcgattatccatgccgccgtcagcgga
cgggactgcctggtgattatgcctaccggcggcggtaaatcgctgtgttatcagatcccc
gccctggtattggatgggcttacgttggtggtgtcgccgctgatttccctgatgaaagac
caggtggatcagctacaagcctacggcgtttcggccgcttgtcttaattccactcagacc
agagaacagcagatggcggtgatcgccggttgccgcagcgggcagattcgcctgctgtat
atcgcaccggagcgcctgaccaacgagggttttcttgagcaattcaccggctggaatccg
tcgttgatcgccattgatgaagcgcactgtatctcccagtgggggcatgattttcgtccg
gaataccgggagctcggttatatcaagcagcgtttcccacagttaccggtggtagcgctg
accgccactgccgacgaaaccacccgcaacgacatcatccgtttgctgggtttgcgtgat
ccgctggttcagatcagcagcttcgaccgtcccaatatccgctatacgctggtggagaaa
ttcaaaccgctcgaccagctgtggctgttcgttcaagggcagcgcggcaaaagcggcatc
atttactgcaacagccgggcaaaagtggaagatatcagcgcccgtctgcagaaccgtggc
ctgagcgtaggggcttatcacgccgggctggataacgaacggcgcgcgcaagtacaggaa
gcatttctgcgtgatgacctgcaggtggtggtggcgaccgtggcgttcggcatgggcatc
aacaaacccaatgtccgctttgtggtgcatttcgatattccgcgcactatcgagtcttac
tatcaggaaaccggtcgcgccggaagggacgggctcgctgccgaagcggcgctgttttac
gacccggcggatatggcgtggctgcgccgctgtctggaagagaaaccggcaagcgcgcag
ctggacattgagcgtcacaaactgaacgccatgggcgcgtttgccgaagcgcagacctgc
cgccgtctggtattactgaattatttcggtgaaaaccgccagcaaccttgcggcaactgc
gatatctgtctggatccgcccaagcgttacgatggcctggtggatgcgcaaaaagcgctg
tcatgcgtgtaccgcgcggggcaacggttcggcatgggatatatcgccgaagtgctgcgt
ggcgccaataatcagcgtatccgggagtttggtcacgataaattgccggtttacggtatc
ggtaaagacaaaacgcaggagcagtggatcagcattttgcgccagctgatccacctgggg
ttgctgactcagaatatcatccagcactccgccctgcagttgacggagtcggcccggccg
gtgctgcgtggtgaagtgccgctgcaattggcggtgccgcgtaccatcaacctcaagccg
cgcgccagccagaaatcctacggcgggaactacgaccgtaagctgttcgccaagctgcgt
aagctgcgcaagtcgatcgccgacgaagacaatattccgccttatgtcgtgttcagcgac
gccacgctgctggagatggcggaggtgatgccggtgacaccgggtgaattgttgaatatc
aacggggtggggcagcgtaagctggagcgttttggcgtaccctttatgacactgattcgc
gaacatctcgataacgacgaataa
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