Musicola paradisiaca: Dd703_2009
Help
Entry
Dd703_2009 CDS
T00927
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dda
Musicola paradisiaca
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dda03016
]
Dd703_2009
Enzymes [BR:
dda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Dd703_2009
Transfer RNA biogenesis [BR:
dda03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dd703_2009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACS85799
UniProt:
C6C608
LinkDB
All DBs
Position
complement(2387864..2389075)
Genome browser
AA seq
403 aa
AA seq
DB search
MKAGVAPSGPLFFSRLSSRRRKTNQEKNVLNYQLITTDDGLSEVCSQARRMPQVALDTEF
VRTRTYYPQLGLIQLFDGERLSLIDPLSITVWQPFCDLLLDPAVTKYLHAGSEDLEVFLN
AFGLLPTPFVDTQILVAFLGKPLSYGFAALVADYMQVTLDKSESRTDWLARPLSEKQCQY
AAADVYYLLPMAIRLVEETTSAGWWEAALDECRQLCQRKQDVLAPEQAYREIGNAWQLKG
RHLACLQKLADWRLRKARERDSAVNFIVREEHLGQVARYLPGSLGELGALGLSGPEIRYH
GKTLLELVAETQTMDAAEYPEPVINLIDYPGYKKAFREIKDLVQQQAERSGLSAELLASR
RQINRLLSWHWKLAPQTHVPELLSGWRGRLFGEPLKGILANYI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaggcgtggcgcccagcggccctctatttttttcccggctgtcatcccggcgc
cggaaaaccaaccaagagaaaaatgtgttgaattatcagttgatcacgaccgatgacggt
ttgtccgaagtgtgctcgcaggcacgtcgtatgccgcaggtggcgctggataccgagttt
gtccgtacccgtacctattatccgcagttgggattaattcaattgtttgacggagagcgg
ttgtcgctgatcgatcctttgtctatcaccgtctggcagccattttgcgatttgttgctg
gatcccgccgtgaccaaataccttcacgctggcagcgaagacctggaggtctttttaaat
gcgttcggactattgccgacgccgtttgtggatacacaaatactggtcgcgttcctgggt
aaacccttgtcctacgggtttgccgcgctggtggcggattatatgcaggtcacgctggac
aaaagcgaatcccgcaccgactggctcgccaggccactgagtgaaaagcagtgtcagtat
gcggcggcagacgtttattacctgctgccgatggctatccggctggtcgaggagacaacg
tccgcaggatggtgggaggccgcattggatgagtgtcggcagctctgccagcggaagcag
gatgtgctggcgccggaacaggcttaccgtgaaatcggcaatgcctggcaactgaaaggg
cgtcatctggcttgtctgcagaaattggctgactggcgtttgcgtaaggcgcgggagcgt
gacagcgcggtcaactttattgtgcgtgaagaacatctgggtcaggtggcgcggtacctg
ccggggtcgttgggggaactgggggcgttggggttaagcggcccggaaatccgctatcac
ggcaagacgttgctggagctggtggcggaaactcagacgatggatgcggcggaatatccg
gaacctgtcatcaatctgatcgattatccgggatacaaaaaagcgtttcgcgagattaaa
gatctggtgcagcaacaggctgaacgttcagggttgtccgctgaactgttggcgtcacgc
cgtcagattaaccggctgttgagttggcactggaaactggcgccgcaaacccatgtgccg
gaactgctttccggctggcgaggacgcctgttcggtgagccgctgaaagggattttagct
aattatatctag
DBGET
integrated database retrieval system
