Musicola paradisiaca: Dd703_2419
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Entry
Dd703_2419 CDS
T00927
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dda
Musicola paradisiaca
Pathway
dda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dd703_2419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dda03019
]
Dd703_2419
Enzymes [BR:
dda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dd703_2419
Messenger RNA biogenesis [BR:
dda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dd703_2419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACS86201
UniProt:
C6C901
LinkDB
All DBs
Position
complement(2836322..2837680)
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AA seq
452 aa
AA seq
DB search
MSFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLNDNPPQAKGRRPVRALILTPTRELAAQIGDNVTAYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILIATPGRLLDLEHQNAVDLSKVDILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKALAGKLLTNPASVEVVRRNTPSELVTQHVHLVDKKRKRELLSHLI
GQNNWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGEIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAASTGEALSLVCVDEHKLLRDI
ERLLKRDIPRVAIPGYEPDPSIKAEPIQNGRQGGRGGAPRQGGRSQDEGAQNRPQGDRAR
HPRREGSVRPAGQRPDGQTARRRPPRKPTSGQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaatctctcggcctgagtgccgatattttgcgcgcggtggaagagcagggg
taccgtgagccgacgccggttcagcgccaggcgattcctgtggtgctggaagggcgcgac
ctgatggccagcgcccaaacgggtaccggcaagaccgccggttttacgctgccgttgctg
caactgctgaatgataatccgccgcaggcgaaaggccgccgcccggtacgggcgctgatc
ctgacgccgacgcgcgaactggcggcgcagattggcgataacgtcacggcgtacagcaaa
tacctgcgtttgcgctcattggtggtgttcggcggcgtgagtatcaatccacagatgatg
aaactgcggggcggcgtcgacatcctgatcgcgacgccgggccgcctgctggatctggaa
caccagaacgcggtggatttgtcgaaggtggatattctggtgctggatgaagccgatcgc
atgctggatatgggctttatccacgatattcgccgggtgctggcgaaattgccggccaag
cggcagaacctgctgttttccgccaccttctccgacgagatcaaagcgctggctggaaaa
ttgctgaccaacccggcctcggtggaagtggtgcgccgcaatacgccgtcggagctggtg
acgcagcacgtacacctggtggacaagaagcgcaagcgcgagttgctttcacacctgatc
ggtcagaataactggcggcaggtgctggtctttacccgtaccaaacatggcgccaaccat
ctggcggaacagttgaataaagacggcattaccgccgctgccattcacggcaacaaaagc
cagggggcgcgtacccgtgcgctggccaatttcaaagatggcgaaatccgcgtgctggtt
gcgacggatatcgccgcacgcgggctggatatcgaccagttgccgcatgtggtgaactat
gagctgccgaacgtgccggaggattacgtccaccgcatcggccgaaccgggcgcgccgcc
tctaccggtgaggcgctgtcgctggtctgcgtggatgagcataaattgctgcgggatatc
gaacggctgttgaagcgggatattccgcgcgtggctatccccggttatgagccggatccc
agcatcaaggctgagccgatccagaacggtcgccaaggcgggcgcggcggagcaccgcgt
cagggcgggcgttcgcaggatgagggggcgcagaatcggccgcaaggcgatcgcgctcgt
catccgcgacgtgaaggttcggtacgtccggcgggccagcgtccggatgggcaaacggcc
cgtcgtcgcccgccgcgtaagccaaccagcggccagtaa
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