Musicola paradisiaca: Dd703_2438
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Entry
Dd703_2438 CDS
T00927
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dda
Musicola paradisiaca
Pathway
dda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dd703_2438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dda03400
]
Dd703_2438
DNA repair and recombination proteins [BR:
dda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dd703_2438
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dd703_2438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
SBDS_domain_II
UB2H
AAA_30
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ACS86220
UniProt:
C6C920
LinkDB
All DBs
Position
complement(2856298..2858310)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKVFKLHSAFQPAGDQPEAIRRLEEGLGDGLAHQTLLGVTGSGKTFTIANVIADLNRPA
MILAPNKTLAAQLYGEMKSFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGQLIQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELAERRQVLLANNKLLEEQRLAQRTTFDLEMMNEL
GYCSGIENYSRFLSGRQSGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYELEKSGGDVIDQVVRPTGLLD
PELEVRPVTTQVDDLLSEIRKRSVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYADRITPSMERAMNETQRRREKQQAYNEKHGIVPQGLNKKVTDILQIG
QPTGQKGKGRSKKAAEPAAGYAQLSPKALEQKMRELENQMLAHAQNLEFEEAARLRDELH
ALKERFIAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtgttcaaactgcattccgcctttcaaccggcgggcgatcagcctgaagcc
attcgtcggctggaagaagggctgggcgacggactggcgcatcagacgctgctgggcgtg
accggttccggcaagacgttcaccatcgccaacgtgattgccgatctcaaccggccggcc
atgattctggcgcccaacaagacgctggcggcccagctgtacggtgaaatgaaatccttc
tttccggaaaatgcggtggagtatttcgtttcctactacgactactaccaaccggaagcc
tacgtacccagttccgatacctttatcgagaaggacgcttcggtcaacgagcatatcgaa
cagatgcggctgtcggccaccaaggcgctgctggagcggcgcgatgtggtggtggtggcg
tcggtgtcggccatttacggcctgggcgatccggatttgtatctgaagatgatgctgcat
ctgacgcaaggcatgttgatcgatcagcgcgctatcttgcggcggctggcggaactgcaa
tacacccgcaacgatcaggcgttccagcgcggtaccttccgggtgcgcggcgaagtgatc
gatatcttcccggcggaatcggacgagattgcgctgcgcgtcgaactgtttgacgaagag
gtggaacgcctgtcgctgttcgacccgttgaccggccaattaatacagacggtgccgcgt
tataccatctacccgaaaacgcattacgtcaccccacgcgagcgcatcctgcaggcgatg
gaggatatcaaggtggagctggcggagcgtcggcaggtgctgctggccaacaacaagctg
ctggaagagcaacgcctggctcagcgcaccactttcgatctggagatgatgaacgaactg
ggctactgctccggcatcgaaaactattcccgttttctctccggccgccagtcgggcgag
ccgccgccgacgttgttcgactatctgccggcggacggcctgctggtgatcgacgaatcc
cacgtcaccattccacaactgggcgggatgtaccgcggcgaccgggcgcgtaaggaaacg
ctggtggagtacggctttcgcctgccgtcggcgctggataaccgcccgatgcgttttgag
gaatttgaagcgttggcgccgcagaccatttacgtgtcggctacgccgggcaattacgag
ctggagaaatccggcggcgacgtcatcgaccaggtggtgcgccccaccggcctgctggat
ccggagctggaagtgcgtccggttacgacgcaggtggatgatttgttgtcggaaatccgc
aaacgctcagtcatcaacgaacgggtgctggtgacgaccctgaccaaacgcatggcggag
gatttgaccgaatatctggaggagcacggcgagcgtgtgcgctatctgcattcggatatc
gataccgtcgagcgcatggagattatccgcgatctgcgtctgggcgagttcgatgtgttg
gtgggcatcaacctgctgcgcgaagggttggatatgccggaggtgtcgctggtggcgatc
ctggatgcggacaaagaaggctttttgcgttccgaacgttcgttgatccagaccatcggc
cgcgcggcgcgcaaccttaacggtaaggcgattttgtacgccgaccggattacgccctcg
atggagcgggcgatgaatgaaacccaacgtcgccgcgagaagcagcaagcctacaacgag
aaacacggcatcgtgccgcaagggcttaacaagaaggtgacggacattttgcagatcggc
cagccgaccggccagaaaggcaaaggccgcagcaagaaagccgccgaacccgccgccggg
tatgcgcaactgtcgcccaaggcgctggagcagaagatgcgtgaactggaaaaccagatg
ctggcccacgcccagaatctggagtttgaggaggccgcccgtctgcgcgacgagctccat
gcgttaaaagagcggtttatcgcggcgtcctga
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