Musicola paradisiaca: Dd703_2917
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Entry
Dd703_2917 CDS
T00927
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dda
Musicola paradisiaca
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dda03400
]
Dd703_2917
DNA repair and recombination proteins [BR:
dda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dd703_2917
Archaeal homologous recombinant proteins
Dd703_2917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
NTPase_1
TsaE
nSTAND3
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACS86692
UniProt:
C6CBT2
LinkDB
All DBs
Position
3402013..3405696
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFARAPFVNNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVSPSQNEVMTRHTAECLAEVEFEVQGTAYRAFWSQRRAHDNPEGNLQPPRVELARCAD
GKILTDRVNDKLALIADITGLDFGRFTKSMMLSQGQFAAFLNADANERAELLEELTGTDI
YGQISEQVFEKHKQSQARLETLQAQVATIELMSDEQRTSLEQQLAVLQQQENDLALQRDE
ILAHQRWYEQLQHYQEALATSVQQRSALDIALIQSQPQMDRLARSEPAEKLRPLYNERER
CAREKSLLTRQITSVKQQIGQYQTALKLLKTQAEKTLSDQKAHAEHRQQQEDLVNERILP
LDQHIATQQALRAQRQQTLDQLNERQKNLIASLDNLQRQQQATRLRLEDIDAYRQQNAIH
QHWGSHIPLWQAQFPQQQKWQQDRQIQQEKANQQQVQAEYLEQQRQTLSEQQQAQSDAQE
RARQRLAEQQQHYEQQEAALPISDLQQQLARNVAQRHDRQQLATSAAVLQRLLSQRTLLE
TQRLGSRQQLEQLEDAQVRQRLDYQRQAEHLRDLEKRYELEQHIVSLESERQQLQLGKEC
PLCGSTHHPAVERYQALRPSETQIRLQTLRQEVETLRATVVQTDTQINLLQHQRQQQQNA
LDSVQQDLSALEQQCVALSKHLLIDFDPQQLERLTQWLTSCEEQEQSLQAHIADRERQSR
QIQESKDLLTSASQLLQQTEQQLALNQQQRDALTLAQSELQQTLEKITQELQRLHQAISQ
TLEGFGLSAPELTQQDDWLRQRQLEWLRWQENEHEHHQKQPYLSAVSADIESSQRQREET
NLAIKSQHQQLAELQRSLEQAQQQRWQWFGNKVVNETLTELRQRSQLLERENQQAQIQWQ
NSQSHISHLNGELGSLEQQHQRADDALNAATEQFGAALRETEFQDEADFRQALLDESTRH
QLMMLKERLNQRQQQVESVHQQAENTLDHHLQNKPASMPEGISHHDIHQLLAGLGDMLKN
EVRHQGELRQQLAGDQQLRDKQQALLNEVERSRQRSEDWGCLNQLIGSQRGDKFRRFAQG
LTLDHLVYLANRQLSRLHGRYLLQRKAADTLELQVADTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSNKTRIDSLFLDEGFGTLDEETLDTALDVLDNLNASGKTIGVISHVEAMK
ERIQVQIRVRKRNGLGISQLDSEYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcagtctgcgcctgaaaaacctgaattcgctacagggcgaatggaaaatc
gatttcgcccgcgcgcctttcgtcaataacagcttgtttgccatcaccggcccgaccggc
gccggaaaaaccacgttgcttgatgctatctgtctggcgctgtatcaccagacaccccgg
ctgaaggtcagccccagccagaacgaggtgatgacccgccacacggcggaatgtctggcc
gaggtagaattcgaggtgcagggaaccgcctaccgcgccttctggagccagcgccgggcg
cacgacaacccggaaggcaatctgcaaccgcccagagtcgagctggcacgctgcgccgac
ggcaaaatcctcaccgatcgcgtcaacgacaaattggcgctgatcgccgatatcaccggg
cttgattttggccgtttcaccaaatccatgatgctgtcgcaaggccagttcgcggccttc
ctgaatgcagacgccaacgaacgtgccgagttattggaggaactgaccggtaccgatatc
tacggtcaaatatccgaacaggtgtttgaaaagcacaaacagtcgcaggccaggctggaa
acactacaggcgcaggtcgcaaccattgaattgatgagcgacgaacagcgcacatcgctg
gaacaacagttggccgtcttacagcaacaggaaaacgatctggcgctgcagcgcgatgaa
attctggcgcatcagcggtggtacgagcagctccagcactatcaggaggcgctggcgact
agcgtacaacagcgttccgcgctggatatcgcgctgatccaatcccaaccgcagatggat
cgtctggcgcgtagcgaaccggctgaaaaactgcgcccgttgtacaacgaacgggaacgc
tgcgcccgcgagaaaagcctgttgacccggcaaatcaccagcgtcaaacagcaaatcggc
cagtatcaaaccgcgctgaaactgctcaaaacgcaggcggaaaaaacgctgtccgaccag
aaagcacatgccgaacaccggcaacagcaggaagatctggtcaacgaacgcattctgccg
ctggatcaacatattgctacccagcaggcgctgcgcgctcaacgacaacaaacgctggat
cagttaaacgagcgacaaaaaaacctgatcgcgtcattggataacctgcagcgacaacag
caggcaacccgtctccggctggaggatatcgacgcctaccggcagcaaaacgccatccac
caacactggggcagccatattccgctctggcaggcccaattcccccagcagcaaaaatgg
cagcaggatcggcaaatccagcaggaaaaagcgaaccagcaacaggtgcaggccgaatat
ctggaacaacagcgacagacgctgtcggaacagcaacaggcccagtccgacgcccaggag
cgcgcccggcagcgtctcgccgaacaacagcagcattatgaacaacaggaagccgcgctg
ccgatatcggatctacagcagcaattggcccgcaacgtcgcccaacgccatgatcggcag
caactggccaccagtgcggcggtgctgcaacgcctgctcagtcaacgcacactgctggaa
acgcagcggttgggttcccgccaacagttggagcaattggaagacgcgcaggtacgccaa
cggctggattaccagcgtcaggccgaacatctgcgcgatctggaaaaacgttacgaactg
gaacaacacatcgtcagcctggagagtgagcgccaacaactgcagctcggtaaagagtgc
ccgctgtgcggctcgactcaccaccccgccgtggagcgctatcaggcgctgcgcccttcc
gaaacccaaatccggttgcagacgctgcgtcaggaggtggaaaccctgcgcgctacggtg
gtacagaccgatacccagatcaacctgttgcagcatcagcgccaacagcagcaaaacgcg
ctggatagcgtgcagcaggatttatccgcgctggaacagcagtgtgtcgcgctgagtaaa
cacttacttatcgatttcgatccgcagcaactggagcgattgacgcaatggctgacgtcc
tgcgaggaacaggaacaatccttacaagcgcacatcgccgaccgggaacgtcaatcacgg
caaattcaggaaagtaaggatttactgacctcagccagccagttactgcaacagaccgag
cagcagctggcgctcaaccagcagcaacgggatgcactgacgctggcccagtcggaactg
cagcaaacactggagaagatcacacaggaattgcagcgcctgcatcaggccatcagccag
acgttggagggtttcggcctgtccgcgcccgaattgacacaacaggacgactggctgcgt
caacgtcagttggagtggctacgctggcaggaaaatgagcacgaacatcaccagaaacag
ccctatctttccgccgtcagcgctgacattgaaagcagtcagcgtcaacgagaggaaacc
aacctggctatcaaaagtcagcatcagcaactggccgaactccagcgctcgctggaacag
gctcagcagcaacgctggcaatggttcggtaacaaggtggtcaatgaaacgctgactgaa
ctgcgtcaacgcagccaactgctggagcgggaaaatcaacaggcacaaatccagtggcaa
aacagccaatcgcatatcagccacctgaacggggagttgggcagtctggaacagcagcac
caacgcgccgacgatgcactcaacgccgcgacggaacaattcggcgccgcactgcgggaa
accgaatttcaggacgaggcggatttccgccaggcattactggatgagtctacacgccac
caattaatgatgttgaaagaacgcctcaatcaacgccagcagcaagtggaaagcgtgcat
caacaggcggaaaacacgctggatcatcacctgcagaacaagccggcgtccatgccggag
ggcatcagtcaccacgatatccaccagttgctggcaggattgggggatatgctgaaaaac
gaggtgcggcatcagggcgagctacgccaacagctcgccggcgatcagcaactgcgtgat
aaacagcaagccctgctgaacgaggtagaacgcagccgccagcgcagcgaagactggggt
tgcctcaaccaattgatcggttcacagcgtggcgacaagtttcgccggttcgctcaaggg
ctcacgctggatcatctggtgtatctggccaaccgtcagttatccagactgcacggccgg
tatctgctgcaacgcaaagccgccgatacgctggaattgcaagtggcggatacctggcag
gcggatgcagtgcgcgacacccgcacgctctccggtggcgaaagctttctggtcagtctg
gcgctggcgctggcattgtccgatctggttagcaataaaacccgtatcgactcgctattc
ctggacgaaggattcggcacgctggacgaagagacgctggataccgcgctggacgtgctc
gacaacctcaacgcctccggtaaaaccattggcgttatcagccatgtggaagccatgaag
gaacggattcaggtgcaaattcgggtgaggaaacgcaacgggctcggcatcagccagttg
gatagcgagtacgcagtgaaataa
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