Musicola paradisiaca: Dd703_3087
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Entry
Dd703_3087 CDS
T00927
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dda
Musicola paradisiaca
Pathway
dda00061
Fatty acid biosynthesis
dda00071
Fatty acid degradation
dda01100
Metabolic pathways
dda01212
Fatty acid metabolism
dda02024
Quorum sensing
dda04146
Peroxisome
Module
dda_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dd703_3087
00071 Fatty acid degradation
Dd703_3087
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dd703_3087
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd703_3087
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dda01004
]
Dd703_3087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dda04147
]
Dd703_3087
Enzymes [BR:
dda01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dd703_3087
Lipid biosynthesis proteins [BR:
dda01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dd703_3087
Exosome [BR:
dda04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dd703_3087
Exosomal proteins of breast cancer cells
Dd703_3087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACS86855
UniProt:
C6CCL2
LinkDB
All DBs
Position
complement(3619775..3621292)
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AA seq
505 aa
AA seq
DB search
MTLSIINEIVNRPPTAGGNLYIATLSEQKTIALCELYRMAGQVANGLLAQGIRAGDTIGI
LADNRFEWVLLDLAALRLKVRTAGFDPGKFTATPALVQDYRLKCLFTDKNADAAHPAIRD
ITSINAFTDVYPDELPAVDYTADETTTIKFTSGSTGVPKGLAATVGSIDASLHGVQRLFA
HAPGDSLFVFLPLSLLQQRYWIYSALKYGHDVVLSNYQSAFVFMAQRQPTVVMGVPAFFE
TARQHIIRQGGDDAAMKVHARALFGERIRYLWTGSAPADAATLGFYPRMDLPLYEGYGMN
ETCIVTKNHPGAFRPGSVGQVIDGKKVVIDENGNVIVYSDYPVNTRYLYAQEGASEKIFT
PDGGVRTGDLGFIDEEGFLYIKGRSDNVIVLDNGKKIDVQPIEARLRNAGVIAECVIFSP
QQTDLVAVVSPASVPADIPAIHAALESVNAATEKDEFISRIVIAGQPFSIDNGLLTSQYK
PIRKAIFERYQHELNATVKESHYVR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacgctctccatcataaacgagattgttaaccggccgccgacggcgggcggcaatctg
tatatcgccaccctgagtgaacaaaaaacgatcgcattatgtgagctgtaccgcatggcg
gggcaggtcgcgaatggtttgctggcgcaaggcattcgcgccggggataccatcggtatc
ctggcggataaccggttcgaatgggtattgcttgacctggccgcgctgcgtctgaaagta
cgcaccgccgggtttgaccccggcaagttcaccgcgacgccggcgctggtgcaggactac
cggcttaagtgcctgtttaccgataaaaacgccgatgccgctcacccggcaatccgcgac
ataacatcgatcaacgcatttaccgacgtttatcctgacgagctgcccgccgttgactat
acggcggacgagacgaccaccatcaagtttacctccggctctacgggcgtgccgaagggg
ctggcggccacggtcggcagcattgacgcttcgctgcacggtgttcagcgtctgttcgcg
catgctccgggcgacagcctcttcgtctttttgccgttatcactgttacagcagcgctac
tggatctattcggcgctgaaatacggccatgacgttgttctgagtaattaccagtcggca
tttgtcttcatggcacagcggcagccgaccgtggtgatgggggtgcctgcgttttttgaa
accgcgcgccagcatattatccggcagggcggcgatgacgcggcgatgaaagtccatgcc
cgcgcgctgttcggcgaacgtatccgctatttatggacggggtctgcgcccgccgatgcc
gcaacgctcggtttctacccgcgcatggatctgccgctttatgaagggtacggcatgaat
gaaacgtgcatcgtcacgaaaaatcaccccggcgccttccgtccgggcagcgtcgggcag
gttatcgacgggaagaaggtggtgatcgatgaaaatggcaacgtcatcgtctacagcgat
tatccggtcaatacccgctatctctacgcccaggaaggagcatcggagaaaattttcacg
ccggacggcggggtacgtaccggcgatctgggatttatcgacgaagagggttttttgtat
atcaaaggccgttcagacaacgtcattgtcctggataacggcaagaaaatcgacgtacag
ccgatcgaagcccgcctgcgtaatgcaggcgtgattgcggagtgcgtcatcttcagcccg
caacaaacggatctggtcgccgtcgtttcaccggcgtccgttcccgccgatattccggcg
attcatgccgcgctggaaagtgttaacgccgcgacggaaaaagatgagtttatcagccgt
atcgtgattgccgggcagccgttcagcattgataacggcctgctgacctctcagtacaaa
cccatccgcaaagcgatattcgaacgttatcaacatgaactgaatgccaccgttaaggag
agtcattatgtccgttaa
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