Musicola paradisiaca: Dd703_3370
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Entry
Dd703_3370 CDS
T00927
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dda
Musicola paradisiaca
Pathway
dda02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dd703_3370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dda03021
]
Dd703_3370
Transcription machinery [BR:
dda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dd703_3370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sas-6-like_oligomerization
BLTP1_C
Motif
Other DBs
NCBI-ProteinID:
ACS87132
UniProt:
C6CE38
LinkDB
All DBs
Position
3942376..3944214
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AA seq
612 aa
AA seq
DB search
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIIDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQCSVAEYPEAITYLLDQYDRVEAGESRLSDLITGFVDPNAEEDLAAAAPE
STELEGEEIEDEEEDEEEDGDNSDSDDDNSIDPELARQKFTELREQYEATRLSIKAHGRS
HQSAIDEINKLSEVFKQFRLVPKQFDLLVNSMRSMMDRVRTQERLIMKLCVEQCKMPKKN
FMTMFTGNETSIKWFEAALAMGKPWSEKLREVTDDVERSLLKLQQIEEETGLTIEQVKDI
NRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEY
RRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPE
ELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLR
SATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHP
SRSEVLRSFLDD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctcaagctacttgtcactcgtggtaaggagcaaggc
tatctgacctatgctgaggtcaatgaccatctgccggaagatatcatcgactccgatcag
atcgaagacatcatccagatgattaatgacatgggcatccaggtaatggaggaagcgccg
gatgccgatgatcttatgctggctgagaacaccgccgatgaagatgccgcagaagcagca
gcgcaggtgctatccagcgtagaatctgaaatcgggcgcaccaccgacccggtacgtatg
tatatgcgtgaaatggggaccgtcgaactcctgactcgtgaaggagaaatcgatatcgcc
aaacgcatcgaagacggcatcaatcaggtacagtgctccgtagccgaatatccggaagcg
atcacctacctgcttgatcagtacgatcgcgttgaagccggcgaaagccgtctatccgat
ctcatcaccggctttgtcgatcccaatgcggaagaggatctggccgccgcagcgcctgaa
agcactgaactggaaggcgaagagattgaagacgaagaagaagacgaagaagaagacggc
gacaattccgatagcgatgacgataacagcatcgatccggagctggcccgccaaaaattc
accgaattgcgtgaacaatacgaagcgactcgtctgagcattaaggcgcatggccgcagc
catcagtccgcgatcgacgagatcaacaagttgtccgaagtcttcaaacagttccgtctg
gtaccgaaacagttcgatctgctggtcaacagcatgcgctccatgatggatcgtgtccgc
acgcaagaacgtttgatcatgaagctgtgcgttgagcaatgcaaaatgccgaagaaaaac
ttcatgacgatgttcaccggcaacgaaactagcatcaagtggttcgaagctgcgctggcg
atgggtaaaccctggtctgaaaaactgcgtgaagtcaccgacgacgttgaacgcagcctg
ctgaaactgcaacagatcgaggaagaaaccggcctgactatcgaacaagtgaaagacatc
aaccgccgtatgtcgattggtgaagccaaagcgcgtcgcgccaagaaagagatggtggaa
gccaacctgcgtctggttatttcgattgccaagaaatacaccaaccgcggccttcagttc
ctggatttgattcaggaaggcaacattggcctgatgaaagcggtagataagttcgaatac
cgtcgtggctacaagttctccacttacgccacctggtggattcggcaggcaatcactcgt
tccattgcggatcaggcgcgcaccatacgtattccggtgcatatgattgagaccatcaac
aaactcaaccgtatttcccgtcagatgctgcaggaaatgggccgtgagcctaccccggaa
gaactggccgaacgcatgctgatgccggaagacaagatccgcaaggtgctgaaaatcgcc
aaagagccgatctccatggaaacgccgattggcgacgatgaagactcgcatttgggcgat
ttcattgaggacaccacgctggagctgccgctggattccgcaacctcggaaagcctgcgt
tctgccacccatgacgtgctggccggtttgacggctcgcgaagcgaaggtgttacgcatg
cgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggcaagcagtttgac
gttacccgtgaacgtatccgtcagattgaagccaaggcactgcgtaaactgcgtcatccg
agccgctccgaagtgctgcgcagcttcctggacgactaa
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