Musicola paradisiaca: Dd703_3657
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Entry
Dd703_3657 CDS
T00927
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dda
Musicola paradisiaca
Pathway
dda02020
Two-component system
dda02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dd703_3657
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dd703_3657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dda03021
]
Dd703_3657
Transcription machinery [BR:
dda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dd703_3657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ACS87414
UniProt:
C6C4K7
LinkDB
All DBs
Position
4241411..4242847
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AA seq
478 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQQALESNPLLEQADNHEEVETQE
SSDHETLDTREALEQKEMPDELPLDAAWDEIYTAGTPSGTSTDYRDEELPVYQGETTQTL
QDYLMWQVELTPFSDTDAAIATSIVDAVDNTGYLTVSLEDIRDSIGDDSLTLEEVEAVLK
RVQRFDPVGVGARDLRECLLVQLSQFDEKTTPRLAEARMIVSEYLDLLANHDFRMLIRSS
RMKEETLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKIQGHWAVELNTDSVPRLQI
NQQYAALGNNARNDSDGQFIRSHLQEARWLIKSLESRNDTLLKVTRCIVEQQQAFFEHGE
EFMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTA
IRALVKKLIAAENPAKPLSDSKLTTLLSEQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagtcagcaactggctatgacaccgcaattacag
caggcgatccgtctactgcaattgtccacacttgaactccagcaggaaatccaacaggcg
ctggaaagcaacccattgctggaacaggctgacaaccatgaagaagtagaaacgcaggaa
agtagcgaccacgaaacgctggacacccgcgaagcgctggagcagaaggaaatgccggac
gagctgccgctcgacgccgcctgggatgaaatctataccgcaggcacaccgtccggcacc
agtaccgattatcgcgacgaagagctgccggtctatcagggcgaaaccactcagacgttg
caggattatctgatgtggcaggtggaactgacgccgttctccgataccgatgccgccatt
gcaacctcaatcgtcgatgcagtcgacaataccggctatctgacggtttcgctggaggat
atccgcgacagcatcggcgacgacagcctcacgctggaagaggtggaggccgtactgaaa
cgagtgcagcgcttcgatcccgtcggcgtcggcgcccgcgacctgcgcgaatgcctgctg
gtacagttatcccagtttgatgaaaaaaccacgccgcggctggccgaagccagaatgatc
gtcagcgaatatctggatctgctggccaaccatgatttccggatgctgatccgttccagt
cgaatgaaggaagaaacgctgaaagaagcgttggcgctgatccaatcgctcgacccgcgc
cccggccagtccatcaataccggcgaatcggaatacgtgatcccggatgtcctggttcgc
aagatccaaggtcattgggcggtggagctgaataccgacagcgtgcccagactacagatc
aaccagcagtacgccgcactcggcaacaacgcccgtaacgacagtgacggtcagttcatc
cgcagccatttgcaggaagcccgctggctgatcaaaagcttggaaagccgcaacgacacg
ttgctgaaagtcacccgctgcatcgtagaacagcagcaggcgttttttgaacatggcgag
gaattcatgaaacccatggtactggcggatatcgctcaggccgtggatatgcacgagtcc
accatctcccgcgtgacaacccaaaaatttctacatagcccgcggggcattttcgaattg
aagtattttttctccagccacgtcaacaccgacagcggcggcgaagcgtcatccaccgcc
atccgtgcgctggtcaagaaactgattgcagcggaaaaccctgcaaaacctctgagcgac
agcaagctgaccaccctactctccgaacagggcattatcgtggcgcggcgcactgtagca
aaatatcgcgagtctttatccatcccgccgtcgaatcaacgtaaacagctggtttga
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