KEGG   Duncaniella dubosii: E7747_00150
Entry
E7747_00150       CDS       T09880                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ddb  Duncaniella dubosii
Pathway
ddb03030  DNA replication
ddb03430  Mismatch repair
ddb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ddb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E7747_00150
   03430 Mismatch repair
    E7747_00150
   03440 Homologous recombination
    E7747_00150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddb03032]
    E7747_00150
   03400 DNA repair and recombination proteins [BR:ddb03400]
    E7747_00150
Enzymes [BR:ddb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E7747_00150
DNA replication proteins [BR:ddb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E7747_00150
DNA repair and recombination proteins [BR:ddb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E7747_00150
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like DUF2095
Other DBs
NCBI-ProteinID: QCD40864
UniProt: A0A4P7VZ69
LinkDB
Position
complement(32054..32815)
AA seq 253 aa
MQLNLKKPIVFFDLETTGVDIIHDRIVEISLIKVLPNGEEIEKTRRVNPEMHIPEEATAV
HHITDEDVAGEPTFRQIARSLANEMTGCDIAGFNSNRFDIPMLDQEFQRAGVKFDFSKAR
FIDVQTIFHKKEQRTLVAAYRFYCGKELDGAHSANADTRATYEVLKAQLDRYEDLPNDME
ELSKYARNSRNVDFMGRIILDDNDREIINFGKYKGRPVDEVFKKDSGYYDWIMKGDFAQN
TKDCFTRIKLRMK
NT seq 762 nt   +upstreamnt  +downstreamnt
atgcaactgaacctcaagaaaccgatagtcttttttgaccttgagaccaccggcgtggat
atcatccatgaccgtatcgttgagatttcgcttataaaggtgctccccaatggcgaggaa
atcgaaaagacccgtcgtgtgaaccctgaaatgcacatcccggaggaagccaccgccgtc
caccatattacagatgaggatgtggccggtgagcctactttccgtcagattgcacggtcg
ctggccaatgaaatgacaggctgcgatattgccggattcaattcaaaccgttttgatatc
ccgatgctggatcaggagtttcagcgggccggcgtgaaattcgatttttcgaaagcaagg
tttattgatgttcagaccatattccataagaaggaacagcgcacgcttgtggcggcctac
cgtttttactgtggcaaggagcttgacggcgctcattcggccaatgccgatacccgtgcc
acttacgaggtgctgaaagcacagcttgaccgctacgaagatctcccgaatgacatggag
gaactgagcaaatatgcccgcaacagccggaatgtggatttcatggggcgtatcatcctc
gatgataacgatcgtgagatcatcaatttcggtaagtataagggccgtccggtcgacgag
gtgttcaagaaagattccggttactatgactggattatgaagggcgatttcgctcagaat
accaaagactgcttcacgcgcataaaacttcgcatgaaatga

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