KEGG   Duncaniella dubosii: E7747_04750
Entry
E7747_04750       CDS       T09880                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ddb  Duncaniella dubosii
Pathway
ddb03030  DNA replication
ddb03410  Base excision repair
ddb03420  Nucleotide excision repair
ddb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ddb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E7747_04750 (polA)
   03410 Base excision repair
    E7747_04750 (polA)
   03420 Nucleotide excision repair
    E7747_04750 (polA)
   03440 Homologous recombination
    E7747_04750 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddb03032]
    E7747_04750 (polA)
   03400 DNA repair and recombination proteins [BR:ddb03400]
    E7747_04750 (polA)
Enzymes [BR:ddb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E7747_04750 (polA)
DNA replication proteins [BR:ddb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     E7747_04750 (polA)
DNA repair and recombination proteins [BR:ddb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     E7747_04750 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E7747_04750 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: QCD41652
UniProt: A0A4P7W1L1
LinkDB
Position
1084193..1087006
AA seq 937 aa
MEKRLFLLDAYALIYRAYYALIRSPRFTGAGFNTSAVFGFCNTLDDLLRKENPSHIAVCF
DPPGGSTFRHEEYPDYKAQRDKQPEDITASVPYIKRILEAYRIPVIEIPGFEADDVIGTL
AVRAAKEGFDTYMMTPDKDYGQLVADHIFMYRPALKGEGFEIRDTARICEKYGIARPSQV
IDLLALEGDASDNIPGCPGVGEKTARTLIEAWGSVENLLENTDKLKGALQRKVSENADKI
RMSKYLATIRTDVPVDIEIDSLVRKDIDIDSLMAVYSELEFRTLLARLKASRKASEAAVV
ETADAQPVTDSPAENPAAAASQPDSSGMGSLFDMPDDSAPTIEAPCEDRSYTVATSPAEA
AKVVARLAKSPAIGMALYAVGEEAMTARWEGIALSAKPCEAFYIPLGDGAARSEILAVIE
PLFTGAATLVSHDVKRDYLLLKNAGIGLSAPYFDTTVAHYLIDPEMKHELRYVVAKYLRL
ELAGIAPDAKAGHPKTALTQEAAVGRYCEEADLSLRLRKPLFDEIASRSMAPLLDEVELP
LIRVLAEMEYTGVRIDSTVLTDLSTRLKQQVRAMEEEAYEMAGGPFNIGSPAQVGMVLFD
RMKIDPKAKKTARGSYSTTEQILEKYAPKVPVVSLILKIRRLKKLIATYLDALPGMVNPK
TGKIHTSYNQTVTATGRISSTNPNLQNIPIRTDDGREIRRAFIADPGDMIMSADYSQIEL
RLIADLSADKDMIEGFLSGDDIHRITASKIYGIPLAEVTDDQRRRAKTANFGIIYGISAF
GLAERLSIARAEAKQLIDGYFSTYPHIREYLEKSVTTAREQGYVTTRMGRRRYLPDINSR
NAVVRGYAERNAVNAPIQGSAADIIKVAMVRIYNEMESRGLRSRMIMQVHDELIFNVHPS
ELDVMKTLVEKQMEGAYHGAVPLTVSAGIAPNWLEAH
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggagaaacgcctgtttctgcttgatgcctacgcgctgatctatcgcgcctactacgcc
ctcatccgttcgccacgattcaccggagcgggcttcaacacatctgccgtcttcggattc
tgcaacacgctcgacgacctcttgcgaaaggaaaacccctcgcacatcgccgtgtgcttc
gaccctcccggcggaagcaccttccgtcacgaggaatatcccgactataaagcccagcgc
gacaaacagcccgaggacatcacagcatccgtcccctacatcaaacggatacttgaagcc
taccgcataccagtgatcgagataccaggattcgaggccgacgacgtgatcggcacactt
gccgtccgcgcggcaaaggaaggattcgacacctacatgatgacccccgacaaggactac
ggccagctcgtggccgaccacatcttcatgtaccgcccggcactaaaaggtgagggattc
gaaatccgcgacaccgcacgcatctgcgagaaatacggcatagcgcgtccctcacaggta
atcgacctcctcgccctcgaaggagacgcctctgacaacatccccggctgcccgggcgtc
ggcgaaaaaaccgcccgcacacttatcgaggcatggggttcggttgaaaaccttcttgag
aacaccgacaagctcaaaggcgcactccagcggaaagtcagcgagaacgccgacaaaatc
cgcatgtcgaaatatctcgccaccatacgcaccgatgtcccggtcgacatcgaaatcgac
agcctcgtccgcaaggacattgacatcgacagcctcatggccgtctactccgaactcgaa
ttccgcacactcctcgcccgtctgaaagcgtcgcgcaaagcctcggaagcggccgtcgta
gagacggccgatgctcagcccgtcaccgacagccctgccgaaaatcccgccgctgccgcc
tcacagcccgactcgtctgggatgggatcgcttttcgacatgcccgacgacagtgcccca
accatcgaagctccctgcgaggaccgcagctacactgtggcaacatcccctgccgaagct
gccaaagtggttgcccggcttgctaaatcgccggcaataggcatggcgctctatgccgtc
ggcgaggaagccatgacagcacgctgggagggaatcgcactctcggccaaaccatgcgag
gcgttctacataccactcggcgacggagcggcgcgcagcgaaatcctcgccgtcatcgaa
ccgctcttcaccggagcggcaaccctcgtcagccacgatgtcaagcgcgactatctactc
ctgaaaaacgccggaatcggcctgtcagccccctactttgacaccaccgtggcccactac
ctcatcgacccggagatgaaacacgaactgcgttacgtagtggcaaaatatctccgtctc
gaactcgccggaatcgctccagatgccaaagccggacatcccaagactgcgctgacgcag
gaggccgccgtcggccgatactgcgaagaggccgacctgagtctgcgcctgcggaagcct
ctgttcgacgaaatcgcctcgcgctcgatggcaccgcttctcgacgaagtggaactcccg
ctcatccgtgtgcttgccgaaatggaatacacaggagtccgcatcgactccaccgtgctc
accgacctctccacccgcctaaagcagcaggtgcgtgctatggaggaggaagcctacgag
atggccggaggcccgttcaacatcggctcgcccgcacaggtcggcatggtgctctttgac
cgcatgaaaatcgaccccaaggccaagaaaacagctcgcggctcttactccacaaccgag
cagattcttgaaaaatatgcgccgaaagtccccgtcgtaagcctcatcctcaaaatccgc
cggctgaagaaactaattgcaacctatctcgacgccctgcccggaatggtcaacccgaag
acagggaagatccacacatcctacaatcagaccgtcaccgccactggacgcatatcgtcg
accaaccccaatctccagaatattcccatccgtaccgacgacgggcgcgaaatccgtcgc
gcattcatcgccgatcccggcgacatgatcatgagcgccgactattcgcagatcgaactg
cgcctcatcgcagacctctcggccgacaaggacatgatcgaaggcttcctgtcgggcgac
gacatccaccgcatcaccgcctcgaaaatctacggcatacctctcgccgaggttaccgac
gaccagcgccggcgcgcaaaaaccgcaaacttcggcatcatctacggcatctccgccttc
ggtctcgccgaacgcctcagcatagcccgcgcggaagccaagcagctcatcgacggctat
ttctcgacctatccccatatccgcgaatatctcgaaaagtcggtcaccaccgcccgcgaa
caaggctatgtcaccacccgcatgggacgccgccgctacctgcccgacatcaattcccgc
aacgcggtcgtgcgcggttatgccgagcgaaacgccgtcaatgcccccatacaaggttcg
gccgccgacataataaaagtggctatggtacgtatatataatgaaatggaaagccgtgga
ctccgctcacgcatgattatgcaggttcacgacgaactcatcttcaacgtccacccatcg
gaactcgacgtaatgaaaacacttgtcgagaagcagatggaaggggcttatcacggagca
gtccccctcaccgtctccgccggaatagcccccaactggctcgaagcccactga

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