Duncaniella dubosii: E7747_06120
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Entry
E7747_06120 CDS
T09880
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ddb
Duncaniella dubosii
Pathway
ddb03410
Base excision repair
ddb03430
Mismatch repair
ddb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E7747_06120 (recJ)
03430 Mismatch repair
E7747_06120 (recJ)
03440 Homologous recombination
E7747_06120 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddb03400
]
E7747_06120 (recJ)
DNA repair and recombination proteins [BR:
ddb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E7747_06120 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E7747_06120 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E7747_06120 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QCD41895
UniProt:
A0A4P7W3C2
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All DBs
Position
complement(1404958..1406679)
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AA seq
573 aa
AA seq
DB search
MTSKWNYCPLTSDEQEVESGLAKRYAGVPPISELLVQRGISSVEEAEKFFHPSLKDMHDP
FLMPDMDKAVHRLNRAMGSKEQIIVYGDYDVDGTTAVALVYKYLRNFYSHIDYLIPTRNE
DGYGISKATIDMAARQGVKLFIILDCGIKATEEIEYARSLGIDFIICDHHVPDETLPPAV
AILNPKLEGSPYPCPHLSGCGVGYKFMQAFAISNGLGCTDLEGMLDLVAVSIAADIVPMV
GENRIMAYHGLKRLNSNPNMGLRAIIRICGLASREITISDVIFKIGPRINASGRMQSGKE
AVDLLVSRDIPDAYARAKEIDRYNQDRKELDKQITDEANAILEEQSETLSDKKSIVIYNK
NWHKGIIGIVASRLTELYYKPSVVLTYSNGVATGSSRSVQGFDVYRAVESVRDLLENFGG
HTYAVGLSLKEENIPEFTRRFEQFVSDNIRPDQLTPQLDIDSYLTFSEITPEFLGLLKQF
NPFGLGNNKPVFCTRNVTDFGTSKLVGRHSEHIKLDLVDPTCGKVMNGIVFNSAQLFDHI
HSGKPFSICYTIEENKHKGGSAIQLFVKAIHLD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaaatggaattactgtccccttacatccgacgaacaagaagtggagtccggt
ctggccaagcgctatgccggcgtaccgcccattagcgagctgctggtgcaacggggcatt
tcctctgtcgaggaggcggaaaaatttttccacccgtcgctgaaggatatgcacgacccg
ttcctaatgcccgacatggacaaagccgtccacaggcttaaccgtgccatggggtcaaag
gagcagattattgtctatggtgattatgacgtcgacggaacaaccgccgtcgcactcgtc
tataaatacctgcgcaatttctactcccatatagactaccttatcccgacgcgcaacgag
gacggatatggtatatcgaaggctaccatagacatggctgcccgtcaaggggtcaagctc
ttcattatccttgattgcggcatcaaggcgaccgaagagatagaatatgcccgctctctg
ggcatcgactttataatctgcgaccaccacgtgcccgacgagactcttccgccggcagtg
gccatacttaatcccaaactcgaagggagtccttatccatgcccccatctttcgggatgt
ggcgtgggctataaattcatgcaggcgtttgcaatctccaacggactcggatgcaccgat
ctggaagggatgctcgatcttgtggccgtatccatcgcagccgacatcgttccgatggtc
ggcgaaaaccgcatcatggcctaccacggactgaagcgtctcaactccaatcccaacatg
ggactgcgggccatcatccgaatctgcgggcttgcatcacgcgaaatcaccatcagcgat
gtgattttcaaaatcggtccgcgcatcaatgcctccggccgaatgcagagcggaaaagag
gccgtcgacctgctcgtgtcgcgcgacatacccgatgcctatgcccgtgcaaaggaaatc
gaccgctataatcaggaccgaaaagaacttgacaagcagattaccgacgaagccaacgcc
atccttgaagaacagagcgagacgctatcagacaaaaaatcaattgtcatctataacaag
aactggcataaaggaatcatcggtattgtcgcatcacgactgacagagctttattacaag
ccatcggtcgtgctgacctattcaaacggcgtggcgacaggctcgtcgcgctcggtacag
ggatttgacgtctatcgtgctgtcgaatcggtccgcgaccttcttgagaatttcggaggc
catacatatgcagtaggactgtcactgaaggaagagaatatccctgaattcacccggcgc
ttcgagcagtttgtcagcgacaacattcgccccgaccagctcaccccgcagctcgacatt
gactcctatctgacattctctgaaatcactccggagtttctcggtcttctcaaacagttc
aatcccttcggcctgggcaacaataaaccggtcttctgcacacggaatgtcactgatttc
ggcacatcgaaactcgtcggccgccacagcgagcacatcaaacttgaccttgtagacccg
acatgcggaaaggtaatgaacggaatagtgttcaacagcgcacagctgttcgaccatatc
cattcaggcaaaccgttcagcatctgctacactatcgaggaaaacaagcacaaaggagga
tctgccatccagcttttcgtcaaggcaatacatctcgactga
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