Duncaniella dubosii: E7747_08085
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Entry
E7747_08085 CDS
T09880
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ddb
Duncaniella dubosii
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddb03019
]
E7747_08085
03009 Ribosome biogenesis [BR:
ddb03009
]
E7747_08085
Messenger RNA biogenesis [BR:
ddb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E7747_08085
Ribosome biogenesis [BR:
ddb03009
]
Prokaryotic type
rRNA processing factors
E7747_08085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
DUF5351
Motif
Other DBs
NCBI-ProteinID:
QCD42240
UniProt:
A0A4P7W480
LinkDB
All DBs
Position
complement(1837976..1839598)
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AA seq
540 aa
AA seq
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MKSELIVDVQPSEVSIALLEDSRLVSLQKESRNIAYAVGDIYLAKVKKLMPGLNAAFVNV
GYEKDAFLHYLDLGSQFSTYSSFLKDAIVDKKNDITVPKIKRLPDIDKHGSITNVLQPGQ
ELMVQIVKEPISSKGPRLTTEITFTGRYMVLIPFGDKISISQKIKTTEEKLRLRQLIESI
KPKNFGVIIRTSAEGKSVRELHHELKTLLRCWDETVAKARSATAPALIFEEESRIVGMLR
DVFSPTFESIHVNDKEIFSQISKYVNLISPESKDIVKLYEDSAPIFDHFNITRQIKSSFG
KTVSFKSGAYVIIEHTEALHVIDVNSGNRSKAAPDQESNALEVNLRAADEIARQLRLRDM
GGIIVIDFIDMNKAEHRQKLYEHMREVMANDRARHNILPLSKFGLMQITRQRVRPALDID
TTEECPSCHGKGKVRPSLLFTDTLHEKLDYLVKTLKVKHFILYVHPFVSAYLKKGFPSLY
RRWQLEFGFNFRIIPDESLAYLQYRVVDRDRNEIDLQEEKDMDSSATKSKSKAKNRSKED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaacttatcgtagacgtccagcccagcgaggtatccattgccttgcttgag
gactcaaggctcgtctccctgcaaaaggagtcgcgcaacatcgcctacgctgtcggagac
atctatctggcaaaagtaaagaaactgatgccgggtctgaacgccgcattcgtcaacgta
ggctacgaaaaagatgcttttcttcattacttggatctcggttcccaattctctacctat
tcctcattcctgaaagacgcaatcgtcgacaaaaaaaacgacatcaccgtcccaaaaatc
aaacgtctgcccgatatcgacaaacacggttcaatcaccaacgtgcttcagccggggcag
gaactgatggtgcagattgtcaaagagccaatatcatcaaaaggcccgcgactgacaacg
gaaatcaccttcacgggacgatacatggtgctgattccattcggcgataaaatctcaatc
tctcagaaaatcaagactacggaggagaaactccgtctgcgccagctcatcgagagcatc
aagcccaaaaatttcggagtcataatccgcacttcagccgaaggcaaaagcgtgcgtgaa
ctccaccatgagcttaaaactctgctccgttgctgggatgaaaccgtcgccaaagcccgg
tcggcaaccgcccccgccctaatcttcgaagaggagagccgaatagtcgggatgctgcga
gatgtgttcagccccacgttcgaaagcatccatgtcaacgacaaggaaatcttcagccaa
atatcaaaatacgtcaatctgatctcgccggaaagcaaggatatcgtaaagctgtatgaa
gacagcgcccctatcttcgaccacttcaacatcacgcgccagatcaaatcgtcgttcggc
aaaaccgtttcattcaaatcgggtgcctacgtaatcatcgaacatactgaagccctccat
gtcatcgacgtgaactccggcaaccgctcaaaggccgcacccgatcaggaaagcaacgca
cttgaagtcaatctccgcgccgccgacgaaatagcccgtcagctccgcctccgcgacatg
ggaggcatcattgtcatcgacttcatcgacatgaacaaggccgaacaccgccagaagctc
tatgaacacatgcgcgaagtgatggccaatgaccgtgcgcgccacaacatcctgccactg
agcaaattcggcttgatgcagatcacacgccagcgagtgcgtccggctctcgacatcgac
acgaccgaagagtgtccgtcatgccacggaaaaggcaaagtccgcccgtcgctactgttc
accgacaccctccacgagaagctcgactaccttgtcaaaaccctaaaggtaaagcatttc
atactctacgtacatcctttcgtttccgcatatctgaaaaaaggattcccgtcgctctac
cgtcgctggcagcttgaattcggattcaacttccgtattatcccggacgaatcactggcc
tacctccaatatcgtgtcgtcgaccgtgacagaaacgaaatcgaccttcaggaagaaaaa
gacatggattcatcggcaacaaaatccaaatccaaagccaagaaccgatccaaggaagac
taa
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