Duncaniella dubosii: E7747_09855
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Entry
E7747_09855 CDS
T09880
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ddb
Duncaniella dubosii
Pathway
ddb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E7747_09855 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddb01007
]
E7747_09855 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddb03016
]
E7747_09855 (lysS)
Enzymes [BR:
ddb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
E7747_09855 (lysS)
Amino acid related enzymes [BR:
ddb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E7747_09855 (lysS)
Transfer RNA biogenesis [BR:
ddb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E7747_09855 (lysS)
Prokaryotic type
Other AARSs
E7747_09855 (lysS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
PASTA
Motif
Other DBs
NCBI-ProteinID:
QCD42556
UniProt:
A0A4P7W3G2
LinkDB
All DBs
Position
complement(2270585..2272327)
Genome browser
AA seq
580 aa
AA seq
DB search
MNILELSEQEIVRRGSLDEMRRRGIDPFPADEFPVTGYSDEIKETFTDDAPQREVSVAGR
IMGRRIMGKASFLELQDSHGRIQVYVNRDEICQGEDKDLYNVVFKKLLDIGDFVGIKGYV
FRTQTGEISVHAQQLTVLGKSIRPLPIVKVKDGVTYDAFDDPELRYRRRYVDLIVNEGVK
DIFVKRTKVMNSMRNYFNEHGYMEVETPILQSIAGGASARPFITHHNSLNIELYMRIATE
LYLKRLIVGGFDGVYEIGKNFRNEGMDRTHNPEFTCMEIYVAYKDYNWMMEFTEKLVEKI
CLDVNGTTHVKVGDNIIDFKAPYRRVTMTDAIKEHTGIDITGMTEEQLRDAARSLGIEVD
ETMGKGKLIDEIFGEKCEGTYIQPTFIIDYPIEMSPLTKRHRNNPNLTERFELMVNGKEL
ANAYSELNDPIDQYERFVEQMKLADKGDDEAMIIDQDFVRSLEYGMPPTSGMGMGIDRLV
MLMTGQTTIQEVLFFPQMRPEKVQRRDKEEAFTAIGVPAEWVAPIYKAGVYTIDQLAGQT
AGKLHQELCGINKKFKLGFKSPLIGDVEQWIAAATTSAAE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccttgaactcagtgaacaagagatcgtgcgccgaggcagcctcgacgaaatg
cgccgacgcggcatagacccgtttcctgctgacgaatttcccgtaaccggttactcagac
gagattaaagaaacatttaccgacgatgcaccccagcgcgaggtctcggtcgccggacga
atcatgggtcgccgcatcatgggcaaagcctctttccttgagcttcaggactcacatgga
cgtatacaggtctatgtcaaccgcgatgaaatctgtcagggcgaagacaaagacctctat
aatgtcgtattcaagaaacttctcgacatcggtgacttcgtaggaatcaaaggctacgtg
ttccgcacccagacaggagaaatttccgtgcatgcacagcagctcacagtgctcggcaag
tcaatccgtccgctgcctatcgtcaaggtcaaggacggcgtgacctatgatgcgtttgac
gatcccgaactccgctaccgccgccgctatgtcgaccttattgtcaacgaaggtgtaaag
gacatcttcgtcaagcgcacaaaggtgatgaactccatgcgcaactacttcaacgagcat
ggctatatggaagtcgaaaccccgattctccagtcaatcgccggcggagcgagcgcccgt
ccttttatcacccaccataactcgctcaatatcgagctttacatgcgaatcgccacagag
ctttatctcaagcgtctgattgtcggcggtttcgacggagtatatgaaatcggcaagaac
ttccgaaacgaaggtatggaccgcacacataacccggaattcacctgcatggaaatctat
gtggcctacaaggactacaactggatgatggaattcaccgagaagctggttgaaaaaatc
tgtcttgatgtcaacggcacaactcatgtaaaggtcggcgacaatatcatcgacttcaaa
gctccatatcgccgcgtgacaatgaccgatgcaatcaaggaacacacaggcatcgacatc
accggcatgaccgaagagcaactccgcgacgcagcccgttcgctcggcatagaagtcgat
gaaacaatgggtaaaggcaagctcatcgacgagattttcggcgagaagtgcgaaggcacc
tacatccagccgactttcatcatcgactatcccatagaaatgtcaccgctcaccaagcgt
caccgcaacaatccgaatctcacagagcgtttcgaacttatggtaaacggcaaagaactc
gccaacgcctactcggaactcaatgacccgattgaccagtatgaacgcttcgtagagcag
atgaaacttgccgacaagggcgatgacgaagccatgattattgatcaggacttcgtacgc
tcgcttgaatacggaatgcccccgacatcgggcatgggtatgggcattgaccgtctcgtc
atgcttatgacaggccagaccacaattcaggaagtgttgttcttcccgcagatgcgccct
gaaaaggtgcagcgccgcgacaaggaagaagccttcaccgcaataggagtaccggccgaa
tgggtcgctccgatctacaaggccggagtctacaccattgaccagctcgcaggccagaca
gccggaaaactccatcaggaactgtgcggaatcaacaagaaattcaaactcgggttcaaa
tctcccctaatcggagacgtcgaacaatggattgctgctgcaactacctcggcagccgaa
taa
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