Duncaniella dubosii: E7747_13205
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Entry
E7747_13205 CDS
T09880
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ddb
Duncaniella dubosii
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddb03032
]
E7747_13205 (gyrB)
03400 DNA repair and recombination proteins [BR:
ddb03400
]
E7747_13205 (gyrB)
Enzymes [BR:
ddb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E7747_13205 (gyrB)
DNA replication proteins [BR:
ddb03032
]
Prokaryotic type
DNA Topoisomerases
E7747_13205 (gyrB)
DNA repair and recombination proteins [BR:
ddb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E7747_13205 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCD43150
UniProt:
A0A4P7W6G1
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All DBs
Position
2950259..2952202
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AA seq
647 aa
AA seq
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MSEDKEREEAYSASNIQVLEGLEAVRKRPAMYIGDISFKGLHHLVYEVVDNSIDEALAGY
ATHIEVTINKDNSITVVDNGRGIPVDMHEKEHKSALEVVLTVLHAGGKFDKGSYKVSGGL
HGVGVSCVNALSTYLRAEVRRDGKIYMQEYSCGKPTSELKVIGESDTTGTTVTFLPDASI
FTVTEYDYDTLANRLRDLAFLNAGITLILTDMRKLDAEGNPRTETFYSRDGLREFVLYLD
SNKESLINDVIHLNTERQGIPVEVALTYNNTYNENVYSFVNNIHTIEGGTHLTGFRRGLT
TTLKKYAEDNKLLEKCKVEVSGDDFREGLTAVISVKVLEPQFEGQTKTKLGNSEVQGAVS
AAVSEALRYYLEEHPRQARTIVDKIVLAAQARHAAMNARQKIQRKSPLAGGGLPGKLADC
SSRHAEDCELFLVEGDSAGGTAKQGRNRTFQAILPLRGKILNVEKAMDHKILDNQEITSL
YRAMRVTIGTEEDPMAINLSRLAYHKIIIMTDADVDGSHIATLLMTFFFRRMRPIIEQGY
LYLATPPLYKCSIRGKKEEYCWTDAQVQQFIAINGEKTKVQRYKGLGEMSAEELRDTTMD
PEQRLLKQVTISDAVEADRIFSMLMGEDVAPRRDFIEANANYANIDA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagacaaagaacgcgaagaggcgtatagcgccagcaatattcaggtgcttgag
ggacttgaagccgtaagaaaacgtcccgccatgtatattggcgatatcagtttcaaagga
cttcaccatcttgtctacgaggttgtcgacaactctatcgacgaagccctcgcaggctat
gccacacacattgaggtgacgatcaataaggacaactctattactgttgtcgacaatggt
cgtggcattccggtagacatgcatgagaaggagcataaaagcgctctggaggtcgtgttg
accgttctgcacgccggtggtaagtttgacaaaggctcttataaggtttccggtggtctt
catggcgtgggtgtgtcgtgtgtcaacgcgctttcgacctatcttcgtgcggaagtccgt
cgcgacggtaaaatttacatgcaggaatactcatgtggcaaacccacttcggagttaaag
gtcataggcgaaagcgacacgacaggaactacagtgacattcctgccggatgcctctatt
ttcaccgtgacagagtatgactacgatacccttgcaaaccgtctgcgagaccttgcgttc
ctcaatgccggaatcacgctgattctgacagatatgcgaaaactcgacgcagaaggcaat
ccacgtactgagacgttctattcgcgcgacggtcttcgcgagtttgttttatatcttgat
tcgaacaaggagtcgcttatcaatgatgttatccatctcaacaccgagcggcaaggcata
cctgtcgaagttgcattgacatataataatacatataatgaaaatgtgtattcttttgtc
aacaacattcatacgattgaaggtggaacacatctcaccggtttccgtcgtggcctcaca
accactctgaaaaaatatgccgaggacaacaaattgcttgaaaaatgcaaggtagaagtg
tcaggcgatgacttccgcgaaggccttaccgctgtaatctctgtcaaggtgctcgaaccg
cagtttgaaggccagacaaagactaagctcggcaatagcgaagttcagggtgctgtatct
gcggctgtaagcgaggctctgagatattatcttgaggaacacccccgtcaggcccgtacg
atagttgataaaatcgtacttgctgcacaggcccgtcatgccgcgatgaacgcccgtcag
aaaatacagcgcaaatctccgctcgccggaggcggtctccccggaaagcttgccgactgc
tcctctcgccatgctgaagactgcgagttgtttcttgtcgagggtgactcggcaggcgga
acggcaaagcagggtcgtaaccgtacatttcaggccattctcccgcttcgtggtaagatt
cttaacgtggagaaagcgatggatcacaagattcttgacaatcaggaaatcacaagcctc
tatcgtgcgatgcgcgtgacgattggaacggaggaagatcctatggctatcaatctttcg
cgtcttgcatatcacaagattatcatcatgaccgatgcggatgtcgacggtagccatatc
gcaacacttctcatgactttcttcttccgccgcatgcgtccgattatcgagcagggctat
ctttatcttgcgactccgccgctttacaagtgctcgattcgagggaaaaaagaagaatat
tgctggacagatgcacaggtacaacagttcattgccatcaatggtgagaaaaccaaagtg
cagcgatacaaaggtcttggtgagatgagcgctgaagaactccgcgacaccactatggat
ccggagcagcgtttgcttaaacaggtgaccattagtgatgctgttgaagctgaccgtata
ttctccatgctgatgggtgaagatgtcgctcctcgtcgcgacttcatagaagcaaatgcc
aactatgcgaatatcgacgcataa
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