Duncaniella dubosii: E7747_13720
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Entry
E7747_13720 CDS
T09880
Name
(GenBank) Por secretion system protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ddb
Duncaniella dubosii
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
E7747_13720
Enzymes [BR:
ddb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
E7747_13720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
Laminin_G_3
RGI_lyase
Laminin_G_2
Laminin_G_1
FG-GAP_3
FG-GAP
He_PIG
TS_C
Sialidase-like_CBM
BBS2_Mid
Motif
Other DBs
NCBI-ProteinID:
QCD43243
UniProt:
A0A4P7W5G6
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All DBs
Position
3079982..3083581
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AA seq
1199 aa
AA seq
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MALLGSLTLSAQYSHQIQAEKLDRGVVAVKTDGGVFVSWRSLVSDDKDMTFDVYRDGVKI
NDAPIKNKTNITDAEGTAASKYTIKSLLNDQISETSSEITVWETPYRKVHLNRPEGGKSP
AGGTHEQRDYTYTPDDVSVGDVDGDGEWELIVKWHPTNAADNSFYRYTGNTIIDCYKLDG
TQLWRIDLGQNIRSGNHYTQFMVYDFDGDGCAEMICKTAPGTIDGKGTAVLMGEDKADAD
YRNSTGHILTGPEYLTVFSGKTGEAIHTIAYNPPRNIHPFDKTTNGWGDSYGGRSERYLA
GVAYLDGKKPSAVFCRGYYTHAYLWAVDFDGKELKERWLHASTEKGKGAYGEGAHSLTIG
DVDGDGFDEIVYGAACVDHDGSLLYRTGAGHGDALHLTHMLPDREGLQVFMPHEETSSSY
KYDTELRDAKTGEILFFEPQSGKDIGRGLAANISSKYRGYEYWSSTNKVFSNGQELSAKR
PSVNFRVYWDGDLLDELLDGTTVSKPNDAITKINTLVNFSQYSNAASCNSTKATPNLQAD
LFGDWREEIILHDSSTESDLLIFTTTIPTDYKVPTLMQDRQYRVAVAWQNVAYNQPPHLS
YNLEEAFNTHGALSIISGSLSQVIYAGDPIQPIQFKVVRATGVEIKGLPEGLGYDFDPAT
LTGTISGTPTAVGEYSFTISTTGAAEDTNATLEGSINVRQNTSIELVAYYPFDKIGETTP
NLIGGEAIFNGKTGEAAEGKKGSALSLDGSNRYVQDDYELIDFGDKSFTIELWMNSTSDK
NCYLLNKGVISPSNGSGNWYGIEYKDNKGTKELRFAIDDNVTKKQIEVTGAEKYFDGQWH
HIVVSRDVVAKHLFMYVDGELVAEGDDPTTSISSPGEPLVIGDVTAFDNSYIGLIDELSI
YRGVMSASKVKEHNEATGEEYIAYFPMDEIGETTPNLAYGEATVNSGSAISVDGLKAGAI
QFDNSYYLTQPIYDAINVGENDFSIEMWARSTDEDGYLLCIGTHNTTNVPGGTGNWIGLE
RKNGYLCFSIDDNNKKTDCKLEDASEIFDGKWHHIACVRSVADKTMKLYVDGKEIASANS
VATGAIKFSETELLFIGGDDESGNRTFAGDIDELIIYPKALSAADVEAHYMLLRLSEIED
IISESANARYTVVDAFSGRIIRTAVGVDREDIIDNLRQGIYILVVEDGTTVRNYKFIKR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggccttactgggatcgctgacattatcagcccagtactcccatcagattcaagctgag
aaacttgacagaggagtagtagccgtcaagactgatggaggtgttttcgtttcatggcgt
tccctcgttagcgacgacaaagacatgacattcgatgtttatcgcgacggagtgaagatc
aacgatgccccaataaagaacaaaaccaacatcaccgatgcagaagggacagcggcatca
aaatatacaataaagtcgctgctcaacgatcagatttcggaaacttcatcggaaattacc
gtatgggaaaccccatatcgcaaagtgcatctaaaccggccggaaggtgggaaatcgcct
gctggcggaactcacgaacaacgcgattacacatacacaccagacgacgtatcggtcggt
gatgtggatggcgatggcgaatgggaacttattgtcaaatggcatccgacaaatgcagca
gacaattccttctaccgttatacaggcaataccataatcgattgctacaaacttgacggc
acgcaattatggcgaattgaccttggtcagaacatccgttcaggcaaccattatacccaa
ttcatggtctatgacttcgacggagacggatgcgcggaaatgatttgcaaaaccgctccc
ggcacaatcgacggcaaaggcacagccgtgcttatgggagaagacaaggccgatgcagat
tatcgaaattcgacaggccacattctcacaggccctgaatacctgactgtattttccgga
aagacgggcgaagcaatacacaccatcgcatacaacccgcctcgtaatatacatccattt
gacaaaacgacaaacggctggggcgattcatacggcggccgttcagagcgctatcttgca
ggtgtagcctatcttgacgggaagaaaccaagcgcggttttctgtcgtggatactacact
catgcatatctgtgggctgtcgatttcgatggcaaggaactcaaggaacgatggctccat
gcgtcaaccgagaaaggcaaaggcgcatacggtgaaggcgctcactctctgacaatcggc
gacgttgacggcgacggctttgatgaaatagtctacggagctgcatgtgtcgatcatgac
ggatcgctcctctatcggactggagccggtcacggcgatgcgcttcatctcacccacatg
cttcctgaccgtgaaggactgcaagtattcatgccgcacgaagagacctcaagcagctat
aaatatgatacggagctacgcgatgcgaagactggtgagatattgttcttcgagccacag
tcaggcaaagatatcggacgtgggcttgcggcaaacatttcgtcaaaatatcgcggctac
gagtactggtcttctacaaacaaggtgttcagcaacggacaagaactttcggcaaaacgt
ccgtcggtaaacttccgcgtttattgggacggagatcttctcgatgagcttctcgacgga
acaacagtcagcaagccgaacgatgcaatcacaaaaataaacacccttgtcaacttcagc
cagtattccaacgctgcatcatgcaactcgaccaaggcgactcctaaccttcaggcagac
cttttcggtgactggcgcgaggaaataatactccacgacagctctaccgagtccgacctg
ctgatattcaccactactattccgacagactacaaagtcccgactcttatgcaggaccgc
caatatagagtggcagtagcatggcaaaacgtggcatacaaccagcctccccacctcagc
tacaaccttgaagaagcattcaacactcatggagctctttcaatcatatcaggctcgcta
agtcaggtcatctatgccggtgaccctatccagcctatccagttcaaggttgtacgtgca
acaggagtggaaatcaagggactgcccgaaggtttaggctacgacttcgatccggccacc
ttaaccggcacaataagcggaactcctacggccgtgggcgagtattctttcaccatctcc
accacaggtgcagcagaggatactaacgcaactcttgaaggctcaatcaatgtgcgccag
aacacgtcgattgaacttgtcgcctattatcctttcgataaaatcggagaaacaacacct
aaccttatcggaggagaagcgatatttaacggcaaaaccggcgaagctgcagaaggaaag
aaaggaagcgcactcagcctggatggatctaacagatatgtacaagatgattacgaactt
atcgatttcggagacaagtcgttcaccattgagctttggatgaactctacgtccgacaag
aactgctatctccttaataaaggcgtaatctccccgtcaaacggttccggcaactggtat
ggcattgaatacaaagacaacaaaggcactaaggaactccgttttgccattgacgacaat
gtgaccaagaaacagattgaagtcaccggagcagagaaatatttcgacggacagtggcat
cacatcgtcgtgtcgcgcgatgttgtcgcaaaacacctgttcatgtatgtcgacggtgaa
cttgttgccgaaggtgacgacccgaccacaagcatttcctctcccggcgaacctctcgtc
atcggagacgtgactgctttcgacaattcatacatcggtcttattgacgagctctcaata
taccgtggagtaatgagcgccagcaaggtcaaggaacacaacgaagccacaggcgaagaa
tacattgcatatttcccgatggatgaaatcggagagacgactccaaatcttgcgtatggc
gaagcaaccgtcaacagcggatcggctatttcagtcgatggactaaaagcaggcgcaatc
cagtttgacaatagctattacctgacacagccgatatatgatgcaataaatgtcggtgag
aacgatttctcaatcgaaatgtgggctcgctctacagatgaagacggctatctcctctgt
attggcacacacaacaccacgaatgttcccggagggacaggtaactggatcgggctcgaa
cgcaagaacggatatctttgcttctcgattgacgacaataacaaaaaaacagactgcaag
cttgaggacgcatcggaaattttcgatggcaaatggcatcatatcgcatgtgtgcgcagt
gtggccgacaagaccatgaagctttatgttgacggcaaggagattgcaagcgccaacagt
gtggcaaccggcgcaataaaattctccgagacagaactgttgtttatcggaggtgacgac
gaatcaggcaaccgtacatttgccggagacattgatgagctcatcatctatccgaaggcg
ctttcggcagccgatgtagaagcacactacatgctcctccgcctttctgaaattgaagat
ataatctctgaatcggccaatgcccgctatacggtcgttgatgcgttcagcggacgtatc
atccgtacagcagtaggtgtcgaccgtgaagatattatcgataacctccggcagggaatc
tatatcctcgttgtggaagacggcactactgtgcgcaactacaagtttattaaacgttaa
DBGET
integrated database retrieval system
