Duncaniella dubosii: E7747_13885
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Entry
E7747_13885 CDS
T09880
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ddb
Duncaniella dubosii
Pathway
ddb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7747_13885 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddb03019
]
E7747_13885 (recQ)
03400 DNA repair and recombination proteins [BR:
ddb03400
]
E7747_13885 (recQ)
Enzymes [BR:
ddb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E7747_13885 (recQ)
Messenger RNA biogenesis [BR:
ddb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7747_13885 (recQ)
DNA repair and recombination proteins [BR:
ddb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E7747_13885 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HHH
GIP1_N
Motif
Other DBs
NCBI-ProteinID:
QCD43267
UniProt:
A0A4P7W5C7
LinkDB
All DBs
Position
3115779..3117953
Genome browser
AA seq
724 aa
AA seq
DB search
MNQRLHDALKEHFGFDSFKGNQEAIMSSLLDGNDVFVLMPTGGGKSLCYQLPALMMDGTA
IIISPLIALMKNQVDAIRHFSEADHVAHFLNSSLNRSAIDQVKSDITAGRTKLLYVAPES
LTKEENIEFLKTIPISFYAVDEAHCISEWGHDFRPEYRRIRPIINEINPRPMIALTATAT
PKVQHDIQKNLGMTNAKVFKSSFNRENLYYEVKPKTQNIDKEIIKYIKNNPGKSGIIYCL
SRKKVEELAEMLVVNDIKALPYHAGMDGATRSSNQDAFLMEKVDVIVATIAFGMGIDKPD
VRFVIHYDMPKSLEGYYQETGRAGRDGGEGQCITFYTAKDLQKMEKFMQGKPLAEQEIGR
QLLIETQSYAEASSCRRRSLLFYFGEEYGHDNCQNCDNCINPKKKVEAKDDLCAVLETVI
ALKEKFKADHVTDVVLGRATSDVKSYEHDQLEVFGSEQGADERLISAVIRQAILAGYLER
DIENYGLLKITAKGKKFLSRPESFKVVEDTDFSEEPEPEILKSGGSCAADDELFSILKDL
RKKIAKKLGLPPYVIFQDPSLEAMATTYPISIEELQNIPGVGQGKAKRYGEEFVKVIKRH
VEDNEIERPEDFRVRSVPSRNSTKYFIIQAVDRKIPLPEIAIAKGLDFSELIDDIEAIVY
SGTKININYYIDEIIDEDSQEEIFDFFKECQTDDLNEAYRELGEDFTEDEIRLMRIKFLS
EMGN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacgacttcacgacgcacttaaagagcatttcggttttgactccttcaagggc
aaccaagaagctatcatgagcagtctccttgacggaaacgatgttttcgtcctgatgccg
accggaggcggaaagtctctgtgctaccagcttcccgccctcatgatggatggtacggcc
attattatttccccgctgatagccctgatgaaaaatcaggtagacgcaatacgccatttc
agcgaggctgaccacgtggcccatttcctaaattcatcgctcaaccgatccgcaatcgat
caggtgaaatcggacatcaccgccgggcgcacgaaactgctctatgtcgcacctgagtcg
ctgaccaaagaggagaatatagaatttcttaaaaccataccgatttcattctacgcggtt
gacgaagctcactgcatttcggaatgggggcatgatttccgccctgaatacagacgcata
cgtcccatcatcaacgaaatcaatccccggccgatgattgctctcacggccaccgccacg
cccaaggtgcagcatgacatacagaaaaatctcggcatgacaaatgccaaagtattcaag
tcatcgttcaaccgcgagaatctgtattatgaagtcaaaccgaagactcagaatatagat
aaggaaatcattaaatatatcaaaaacaaccccgggaaatcaggcatcatctattgcctg
agtcgaaaaaaagtcgaggaacttgctgagatgcttgtagtaaacgacatcaaggctctt
ccctatcacgcaggcatggacggagcgacacgcagttccaatcaagatgccttcctgatg
gagaaagtcgatgtcatcgtggccaccatagcttttggcatgggaattgacaaacccgac
gttagatttgttatacactatgatatgcccaagtcgcttgaaggctattatcaggagaca
ggccgtgccggccgagacggaggtgagggacagtgcatcaccttctatacggccaaggac
cttcagaaaatggagaaattcatgcaaggcaaaccgcttgccgagcaggaaatcggacgc
cagctcctgattgagacccaaagctacgctgaggcaagcagttgccgccgacgttcgctg
ttgttttatttcggcgaagaatacggacatgacaactgccagaactgtgacaactgcatt
aatccaaagaaaaaagtggaagctaaagatgatttatgcgcggtgttggaaaccgtcatc
gcactaaaagaaaaatttaaagccgaccatgttaccgacgttgtgctcggacgggctacc
tcagatgtcaaatcctatgaacatgaccagcttgaagtattcggcagcgaacaaggcgcg
gacgaacgccttatcagtgccgtaatccgccaggccattcttgccggctatctcgaacgc
gatatcgagaactatggacttttaaaaatcacagcgaaaggcaaaaagttcctttctcgt
cccgaatcattcaaagtggtcgaggacacagatttcagtgaggagccggaaccagagatc
ctgaagagcggaggctcgtgtgccgctgacgacgaacttttcagcatcctcaaagacctt
cgcaagaagatcgccaagaagctcggactgccaccatatgtgatattccaagatccatcg
ctcgaagcgatggccaccacctatcctatttcaattgaggagctccagaatatccccgga
gtcggccaaggaaaggcaaagcgctatggcgaagaatttgtcaaagtaatcaagcgccat
gtcgaggataatgagattgaacggccggaggatttccgcgtacgcagtgtaccgagccgc
aactctaccaaatatttcataattcaggctgtggaccgtaaaattcccctgccggaaatc
gccatagccaagggtcttgatttcagcgagcttatcgatgacatcgaagccatcgtatat
tcaggcacaaaaatcaacatcaactactatatcgacgaaatcatcgacgaggattcacag
gaagaaatattcgacttcttcaaggaatgccagaccgacgatctcaatgaagcataccgc
gaactcggagaagatttcaccgaagatgaaatccgtctgatgcgcatcaaatttctctct
gagatgggcaattga
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integrated database retrieval system
