Duncaniella dubosii: E7747_14125
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Entry
E7747_14125 CDS
T09880
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ddb
Duncaniella dubosii
Pathway
ddb03030
DNA replication
ddb03430
Mismatch repair
ddb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7747_14125 (holA)
03430 Mismatch repair
E7747_14125 (holA)
03440 Homologous recombination
E7747_14125 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddb03032
]
E7747_14125 (holA)
03400 DNA repair and recombination proteins [BR:
ddb03400
]
E7747_14125 (holA)
Enzymes [BR:
ddb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E7747_14125 (holA)
DNA replication proteins [BR:
ddb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E7747_14125 (holA)
DNA repair and recombination proteins [BR:
ddb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E7747_14125 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta2
DNA_pol3_delta_C
AAA_22
E3_UFM1_ligase
Motif
Other DBs
NCBI-ProteinID:
QCD43305
UniProt:
A0A4P7W7A6
LinkDB
All DBs
Position
complement(3185503..3186537)
Genome browser
AA seq
344 aa
AA seq
DB search
MASSNPTFSELKRQLAARVKLAPVYLLHGEEGYYIDELVKDFEALVPEEERDFNLYILYA
PESGVETVMDVCHRYPMMAQRQVVIVKEAQAIRADQLNKLHSYVERPNETTVLVISCRGS
QAKGKELLAAVKKNGVIFESKRLSERNVVPVINDLIKEKGLNVDPKSLAMLRDYIGADLS
RLYNEIGKLALILGPGAMVTPEAIERNIGVSKDYNNFELVDAIVNRNPAKAFAIVEYFRN
NPKNNPTVMTVSSLFNQFSNLLIYHYTRDKSQSGYMDALGMRNAWGLRVYEVAARNYNVR
QTIEIISAIREFDTRSKGIGSRQNEYDLLKDLVYRILTARGFIG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatcgaatcctactttctcagaattaaaacgccagcttgcagcgcgcgtcaaa
cttgcgcctgtatatcttcttcacggagaggaaggctattatattgatgaacttgtaaag
gattttgaggctcttgtcccggaggaggagcgagatttcaacctttatatcctatatgcc
cctgaatccggagtagagacggtgatggatgtgtgccatcgctatcccatgatggcgcaa
cggcaggtggtgattgtcaaagaggctcaggctatacgcgccgatcagctgaacaagctt
catagctatgtcgagcgtccgaatgaaacgacagttcttgtgatttcatgccgtggctca
caggctaagggcaaggagctgcttgccgctgtgaagaaaaacggcgttattttcgagtca
aagcgcctgagcgagcgtaatgttgtgcctgtgataaacgatcttataaaggagaagggg
ttgaatgtggatccgaagtcattggctatgctgagggattacatcggggcagatctttcc
cgtctgtataatgaaatcggtaagctcgctcttattctcggtccgggggcaatggtcacg
cctgaagcgattgaacgcaacatcggagtgtcgaaagactataataattttgaactggtc
gatgcgattgtgaaccgcaatcctgccaaggcttttgcgattgtggagtacttcagaaac
aatccgaaaaacaatcctacggtcatgacggtgtcttcgctgttcaatcagttctcaaat
ctgctgatataccactacacgcgtgataaatctcagagcggttatatggatgcgcttggt
atgcgtaacgcatggggattgcgggtctacgaagttgccgcgcgtaattacaatgtcagg
cagacaattgagattatatctgcaatccgtgaatttgatacccgaagcaagggcattggt
tcgcgtcagaatgaatatgatttgttgaaagatctggtctatcgtattcttactgcgcgt
gggtttatcggttga
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