Dickeya parazeae: Dd586_0231
Help
Entry
Dd586_0231 CDS
T01138
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00730
Thiamine metabolism
ddc01100
Metabolic pathways
ddc01240
Biosynthesis of cofactors
Module
ddc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Dd586_0231
Enzymes [BR:
ddc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Dd586_0231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACZ75128
UniProt:
D2C1V2
LinkDB
All DBs
Position
complement(266003..267964)
Genome browser
AA seq
653 aa
AA seq
DB search
MSTESKLPTELMASEEKTPSSRREQRAAAQQFIDTLRGSTFPNSQRIYLTGSRPDIRVPM
REIQLSPTLLGGSRDNPRYEPNEAVPVYDTAGPYGDPAVTPDVHRGLGRLRADWIAERDD
TETLSHVSSGFTQQRLADSGLDHLRFEHLPHPRRAKAGRRVTQLHYARQGVITPEMEFIA
IRENMGRERIRGEVLRQQHPGHSFGALLPDDITPEFVRQEVAAGRAIIPANINHPESEPM
IIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRN
SPVPIGTVPIYQALEKVNGIAENLTWELFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK
RLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICSAYDVALSLGDGLRPGSIQDAND
EAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLT
TDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKNDVKQGLIAYKIAAHAADL
AKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGP
KFCSMKITQEVRDYAARQEAQPIDVGMANMSAEFRARGSELYHTATSLPQEER
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgaatccaaacttcccacggagctgatggcttccgaagaaaaaacaccgtcc
agtcgtcgtgaacaacgtgctgccgctcaacagtttatcgatacgctgcgcggctcaacc
ttcccaaactcacagcggatttatttgaccggttcacgcccagatattcgcgtacccatg
cgggaaattcagctaagcccgacactgctgggcggtagccgcgacaacccgcgctatgaa
cctaacgaagcggtgccggtttatgataccgccggtccctacggcgacccggccgtcacg
ccagatgtacaccgtgggcttggcagactgcgggccgactggattgccgaacgcgacgac
acggaaaccttatcgcacgtcagttccggttttacccaacaacggctggcagatagtggt
ctcgaccatctgcgttttgaacacctgccacaccccagacgcgccaaagcgggacgccgt
gtcacccagttgcattacgcccgtcagggagtcatcacgccggagatggaattcatcgcc
atccgcgaaaatatgggacgtgagcgtattcgcggcgaagtgctgcgccagcagcatccg
ggacacagtttcggtgcgttgctgccggacgacatcacaccggaattcgtgcgtcaggaa
gtcgcggccgggcgcgcgattatccccgccaacattaatcacccggaatcggagccgatg
atcatcggccgtaattttctggtgaaggtgaacgccaatatcggcaactctgcggtgacc
tcttcgattgaggaagaagtcgagaaactggtgtgggccacccgctggggtgcggacacc
gtgatggacttatccaccgggcgctatattcatgaaacccgcgagtggatcctgcgcaac
agcccggtgccgatcggcacagtgcctatctatcaggcgctggaaaaggtcaacggtatt
gcggaaaacctcacctgggaactgttccgcgacaccttgctggaacaggccgaacaaggg
gtagattatttcaccattcatgccggagtgttgttgcgctatgtaccgatgaccgccaaa
cgcctgacgggcattgtgtcgcgcggcggctccatcatggcgaaatggtgcctgtcgcac
catcaggaaaatttcctctaccagcatttccgcgaaatttgcgaaatctgtagtgcctat
gacgtcgccctgtcactgggtgatggactgcgccctggctcgattcaggacgccaatgac
gaagcgcagttcgccgaactgcacacgctgggcgagctgactaaaatcgcctgggaatac
gacgtgcaggtaatgatcgaaggccccggtcatgtcccgatgcagatgatccgccgtaac
atgaccgaagagctggaacactgccatgaagcgccgttctacacgctgggcccgctcacc
acggatatcgcgccgggctatgaccatttcacgtcgggtatcggtgcggcgatgatcggc
tggttcggctgcgctatgctgtgctacgtcaccccgaaagagcatttaggcctaccgaac
aaaaacgacgtcaaacaagggctgatcgcctacaagatcgccgctcacgccgccgatctg
gcgaaggggcaccccggcgcgcagatccgcgataacgccatgtccaaggctcgctttgaa
ttccgctgggaagaccagttcaatctggcgctggacccggaaaccgctcgcgcctaccac
gatgaaaccctgccgcaggaatctggcaaagtcgcgcatttctgctcgatgtgcgggccg
aaattctgttcgatgaagatcacacaagaagtacgcgattacgccgcccgtcaggaagcg
caaccgatcgacgtcggcatggcaaacatgtccgccgaattccgcgcccgtggtagcgag
ctgtaccacaccgccaccagcctgccacaggaggaacgctga
DBGET
integrated database retrieval system
