KEGG   Dickeya parazeae: Dd586_0400
Entry
Dd586_0400        CDS       T01138                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ddc  Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddc02048]
    Dd586_0400
Enzymes [BR:ddc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dd586_0400
Prokaryotic defense system [BR:ddc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dd586_0400
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII Helicase_C GASH
Other DBs
NCBI-ProteinID: ACZ75296
UniProt: D2C2Q3
LinkDB
Position
456767..460051
AA seq 1094 aa
MSMQHVPKFQEEYSAKIPALTLLTSLGWSYITPDQAQEARGNKSDQVVLSQILREQLQKR
TFTFAGRDYPLSDKAIDNLIAEVNSPALNEGLLTANERLYNHLMYGISVTEFIDSKKANP
TIALIDWHNPVNNSFVFTEEFSVTRSNGIESRRPDIVCFVNGIPLAIIEAKRPDSNAKKG
PTLDEGISQSLRNQRHDEIPRLFAYSQLLLSINGHDGRYGTCGTPAKFWANWREEDISDA
EMYAIKNHSLSTEQFTALFSHRSQAIVDWYQQLITSGELAVTGQDKLLISLLSPVRLLEM
TRYFTLFDKKVGKVVARYQQVFGIKRLIERINTKRPDGGREGGVIWHTTGSGKSFTMVFL
SKVLILHETLKQCRIVVVTDRIDLEKQLSRTFISGGELSGKRDKASAIATSGTRLAEQIG
KGTERIIFSLIQKFNTAIRLPGCVNTSSDIIVLIDEGHRSQGGENHIRMKQALPNAAFVA
FTGTPLLKDDKTTNKFGPIVHAYTMQRAVEDKTVTPLLYEERIPDLDVNERAIDSWFERI
TEGLSDEQKTDLKRKFARKGQIYSTDDRIRLIALDIANHFDKNIDDGLKGQLACDSKVSA
IKYKKYLDEAGLFESAVVISSPDTREGNTEIDESTMPEVAQWWKENVGSQDEQVYTQHII
ERFDKDDSLKILIVVDKLLTGFDEPKNAVLYIDKPLKGHNLIQAIARVNRLHPKKKFGLL
IDYRGILRELDTTIQHYQKLASRTQGGYDINDLVGLYGQMSTEYKRLPQLYKNLWAIFSG
VKNKNDTQQLRQVLIPRIEERNGELVDIHLRVREDFYEALTAFARCLKVALQSATFFEDK
SFSDDDRYHYKETVSQFSSLRQLVQQDAGERIDYDEYAAQVKKLLDKHVVGVEVREPDGV
YEVSQMGQFQQPEDWSDEKTRNETDIIKTRVTRMIEQQLRDDPYAQEAFSKLLRQAIEEA
EKLFDHPLKQYLLFREFEEQVQERRLNDIPDAFAGNHHAQAYFGVFRKILPEVFAIVDAQ
VQDKWVKLAFTLDQLVDVSVAENSINPQNIEADIRKKLLPMLFKECKAIGGGMDQAKKMV
EMIVQITRVGLSGV
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgagtatgcaacatgtgccaaaatttcaggaagaatacagcgctaaaataccggcacta
acattactcaccagtcttgggtggtcatatattacgcctgatcaggcgcaggaggcacgt
ggtaataagtcggatcaggtggtattaagccagattctgcgtgagcaattgcaaaagcgt
accttcacttttgcaggacgggactatccgctctccgataaagcgattgataacctgatt
gccgaagtaaacagcccggctttgaatgaaggtttgctcaccgccaatgagagactctat
aaccacctgatgtacggtatttctgtcactgagtttattgatagtaaaaaggctaacccc
accatagcgttgattgactggcacaatccggtgaataacagttttgtctttactgaagaa
ttcagtgtgactcgctctaatggtattgagtcgcgcaggccggatatcgtttgttttgtg
aatggtattccgctggcgattatcgaggccaaacgtccagatagtaatgccaaaaaaggc
ccaacccttgatgaagggatttcgcaaagcctgcgtaatcagcggcacgatgaaattccg
cgtttattcgcttacagccagctactgttatccattaatggtcatgatggccgttacggc
acctgcggcacgccagcgaagttttgggcgaactggcgtgaagaggatatctcggatgct
gagatgtatgccatcaagaatcactcactttccacagaacaattcactgcgctgttcagc
catcgttctcaagccattgtggattggtatcaacagttaataacgagcggtgaacttgcc
gttaccgggcaagataagctgttaattagcctattgtcgccagttcgtctgttggagatg
actcgctactttacgctgtttgataagaaagtgggaaaagttgttgcccgctatcagcag
gtgtttggcatcaagcgtctgattgagcgtattaataccaaacgtcctgatggtgggcgt
gaaggtggcgtgatttggcataccaccggttctggtaaatcattcacgatggtttttctg
agcaaggtgctaattctgcatgaaaccctaaagcagtgccgcattgtggtggtgactgac
cgtattgacctggaaaaacaactcagccgtacctttatttctggcggcgaattgtctggg
aaacgagataaagcatctgctatcgcgacctccggtacgcggctggcggagcagattggc
aaagggacggagcgcattattttttcgctgattcagaagtttaataccgcgattcggctg
ccgggatgcgttaataccagctcagatattatcgtcttgattgatgaaggccaccgtagc
cagggcggtgaaaaccatatccgcatgaagcaggcattgcctaatgccgcgtttgtcgct
tttaccggcaccccgctgctaaaagacgataaaaccaccaataagtttggtccgattgtg
catgcctacaccatgcagcgggcagtggaagacaaaacggtaacgccgctgttatacgaa
gagcgtattcctgaccttgatgttaatgaacgtgcgattgatagctggtttgaacgtatt
accgaaggattaagcgacgaacaaaaaacagatctcaaacgtaagtttgccagaaagggg
caaatatacagcacagacgatcgcatccgtcttatcgcattggatattgctaaccacttc
gacaagaatattgatgatggcttaaaaggccagctcgcctgtgacagtaaggtctctgcg
attaagtataaaaaatatcttgatgaagcaggcttatttgaatcagcggtggttattagc
tcgcccgatacccgtgagggtaatactgagatcgatgaatccaccatgccggaagtggcg
cagtggtggaaagagaatgttggctcgcaggatgaacaggtttatacccagcatattatc
gagcgttttgataaagatgattcgctcaaaatcctgattgtggtcgataagctgctgaca
ggctttgacgagccgaaaaacgccgtgctctatatcgacaagccgcttaaaggacacaac
ctgatccaggcgattgctcgcgttaaccgtttacatccgaaaaagaaatttggattgttg
atcgattatcgcggcattctccgcgaactggataccaccattcagcactaccaaaagctc
gcttcccgtacccaaggcggttacgacatcaacgatcttgttggtctctacggccagatg
agcacggagtacaaacgtctccctcagctttataaaaatctgtgggcaattttttctggt
gtgaaaaataagaatgacacccagcaactgcgccaggtgctaataccacgtattgaagag
cgaaacggcgaacttgtcgatattcatctgagggtgcgtgaagacttctacgaagcgctg
acggcgtttgcccgttgcctgaaagtagcattgcaatctgctacgttctttgaagataag
agcttcagtgatgatgatcgttatcactataaagaaacggtgagtcagttctctagctta
cgccagttagttcagcaggatgcgggcgagcgtatcgactacgatgagtacgctgctcag
gtgaaaaaactgctggataaacacgtggtgggtgttgaggtccgagagcccgatggcgta
tatgaagtgagccagatggggcaattccagcaacccgaagactggagcgatgagaaaact
cgcaacgaaacagacatcatcaaaacacgcgtcacgcggatgattgaacagcaactgcgt
gacgacccttacgcacaggaggctttttctaagctattgcgtcaggcgattgaagaagcg
gagaagttatttgatcatccgttgaagcaatacctgctgtttcgtgagtttgaagagcaa
gtacaagaacgtcggctgaatgatatccctgatgcatttgccggtaatcaccatgctcaa
gcttattttggtgtattcagaaaaattctgccggaggtttttgcgattgttgatgcacag
gtacaggacaaatgggtaaaactggcatttactctcgatcagcttgtcgacgtttcggta
gcggaaaactcgattaatccacaaaacattgaagcggatatccgtaagaaactgctacct
atgctgtttaaagaatgcaaggcgattggcggtggtatggatcaagcaaaaaagatggtg
gagatgatcgtacaaatcacccgagtcgggttgagtggggtttaa

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