Dickeya parazeae: Dd586_0473
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Entry
Dd586_0473 CDS
T01138
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ddc
Dickeya parazeae
Pathway
ddc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_0473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddc02000
]
Dd586_0473
Transporters [BR:
ddc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dd586_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACZ75368
UniProt:
D2C2X5
LinkDB
All DBs
Position
complement(529107..530732)
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AA seq
541 aa
AA seq
DB search
MAIRFQTGKTLRFSLLSAGLLSLAVSTSPFATAADATAPVQGGTLNIGLGSDTPVIDPSI
TAYSVAALVARNVVDSLVGQAEDNRFTPWLAERWEISDNNTRYTFHLRKDVTFSDGTKLD
AAAVKYNLDRILDPKTTSSYAKSLLGPIDSITTPDDYTVVISYKSPFAALLQGLSLPYLG
IQSPTYLKNTPNTSNTIVGSGPFILESFVKGSGSRLTKRPDYHWGPGYAAHSGPAYLDKI
EFKYLPESSVRLGALSSGQVQAIDAVPPANATTLKKDTRLELITRENPGVNRVLYLNTSK
GPFQDINVRRAFLHAVDAPSATKVAFFGTLKAADSVLGPSTLYYDPSAAALGGFDLKKAN
QLLDDAGWKTKDSDGYRTKDGKRLTVQFVYSTGSSEAAEITLFQAVQYQVKQAGIDVQLN
PVDGGGFISRTNDNDYDIASNYFVRAEPDILRTVFDSNYIPPNGNNFSRIHALDDKLRKA
IGASDAERQQLYSAIQHELLDQAYAVPLFIPAYQLGLSKKVQGISWATNAKPNFYDVWIK
P
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacgatttcagacaggcaaaacattacggttctccttgctcagtgcaggattg
ctttctctggcggtaagtacctcgcctttcgcaacagcggcagacgcgacggccccggta
caaggcggtacgctcaatatcgggcttggcagtgacaccccggttatcgacccctcgatt
accgcttactccgtggccgcgctggtggcacgcaacgtggtggattcgctggtcggacag
gcggaagacaaccgttttaccccttggctggctgaacgctgggaaatcagcgacaacaac
acccgctatacctttcacctgcgcaaagacgtgacgttcagtgacggcaccaaactggac
gccgccgccgtgaaatacaatctggaccgtattctcgacccgaaaaccacctccagctac
gccaaatcactgctggggccgatcgacagcattactacgccggacgactacaccgtggtc
atcagctacaagagcccgttcgccgcactgttgcaggggctgagcctgccgtatttgggc
attcagtcgccgacgtacctgaaaaacaccccgaataccagcaacactatcgtcggttcc
ggtccgtttattctggaatctttcgtcaaaggcagcggcagccgtctgacaaaacgcccg
gattaccactgggggccgggttatgctgcgcattccggtccggcttatctggataaaatc
gaattcaaatacttgccggaatcgtcggtgcgtctcggtgccctgagcagtggtcaggta
caggcgattgacgccgtaccaccggccaacgccaccaccctgaaaaaagacacccgtctg
gaattgatcacccgcgagaaccccggtgttaaccgtgtgctgtacctgaatacgtctaaa
ggcccgttccaggacatcaacgtacgccgcgccttcctgcatgccgtggatgccccttca
gcgaccaaagtggcgttcttcggcacgttaaaagcagccgacagcgtactgggcccatcg
accctgtattacgacccatccgccgccgcgttggggggctttgacctgaaaaaagccaac
cagttgctggacgacgcgggctggaaaaccaaagatagcgacggttaccgcaccaaagac
ggtaaacgcctgacggtacagttcgtctacagcaccggctcgtcggaagcggcggaaatc
accctgttccaggcggtacagtatcaggtgaagcaggcgggtatcgacgtccagcttaat
ccggtcgacggtgggggcttcatcagccgtaccaacgataacgactacgacatcgcctcc
aactacttcgtacgcgccgagccggatatcctgcgcaccgtgttcgactccaactatatt
ccgcctaacggtaataacttcagccgcatccacgcactggatgacaagctgagaaaagcc
atcggcgccagcgatgccgagcgtcagcagctttacagcgctatccagcatgaattgctt
gatcaggcttacgcggtaccgctgttcatcccagcctaccaattaggtctgtcgaagaaa
gtacagggcattagctgggccaccaacgccaaaccgaacttctatgatgtctggattaaa
ccgtaa
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