Dickeya parazeae: Dd586_0486
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Entry
Dd586_0486 CDS
T01138
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_0486
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dd586_0486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
GvpD_P-loop
ABC_tran
RecA
AAA_22
SLFN-g3_helicase
AAA_14
AAA_16
Rad51
AAA_24
NTPase_1
nSTAND3
AAA
DUF7125
cobW
AAA_29
Zeta_toxin
AAA_5
Viral_helicase1
DZR
Motif
Other DBs
NCBI-ProteinID:
ACZ75381
UniProt:
D2C2Y8
LinkDB
All DBs
Position
complement(545647..547032)
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AA seq
461 aa
AA seq
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MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAAASSSSRSDRFSGYAGDSGS
VSRVQKLSDISLEALPRFSTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL
SEQMKTLYVTGEESLQQVAMRAHRLGLPAQHINMLSETSIEQICLIAEQEQPKLMVIDSI
QVMHLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGSLAGPKVLEHCIDC
SVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVNNPSAIFLSRGDEITSGSS
VMVVWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVF
VNVVGGVKVTETSADLALLLSLVSSFRDRPLPQDVVVFGEVGLAGEIRPVPSGQERIIEA
AKHGFKRAIVPFANMPKKPPANMQVMGAKKLSDALAILDDL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccgtcaaacgtgcttttgtctgtaatgaatgcggggctgattacccacgc
tggcaggggcaatgcagcgcctgccacgcctggaacaccatcaccgaggtgcgcctggcc
gccgcgtcctcctcatcacgcagcgatcgcttctccggttacgccggcgacagcggcagt
gtcagtcgggtacagaaactctctgacatcagcctggaggcgctgccgcgtttctccacc
ggctttttggagtttgaccgggtattgggcggtggcgtggtccccggcagcgccattctg
atcggcggtaacccgggtgcgggtaaaagtaccctgctgctgcaaaccctgtgcaaattg
tccgaacagatgaaaaccctgtacgtcaccggcgaggaatctctccagcaagtggcgatg
cgcgcccaccgcctcggtctgcccgctcaacatattaatatgctgtcggaaaccagcatc
gagcagatctgcctgatcgccgagcaggaacaaccgaagctgatggtgatcgactctatc
caggtgatgcatctggccgatattcaatcgtcacccggcagcgtggcgcaggtgcgcgaa
accgccgcctacctgacgcgctttgcgaaaacccgtggtgttgccatcatcatggtcggt
cacgtcaccaaagacggctcgctggctggtccgaaggtactggagcattgtatcgactgt
tcggtactgctcgatggcgacgcggactcccgttttcgcacactgcgcagccacaaaaac
cgttttggtgccgtcaacgaactgggcgtattcgccatgacggaacaggggctgcgggaa
gtgaataatccatccgccatcttcctgagccggggtgatgaaatcacatcgggcagttcc
gtgatggtggtatgggaaggcacccgaccactgctggttgaaattcaggcgctagtggac
caatcgatgatggcgaacccgcgccgggtcgctgttgggctggaacaaaaccggctggct
attctgctggccgtattgcatcgccacggcgggttgcagatgtcggatcaggacgtgttc
gtcaacgtggtcggtggcgtcaaagtcacagaaaccagcgccgatctggcattgctgtta
tcgctggtgtccagcttccgcgaccgaccgctgccgcaggatgtggtggtgttcggtgaa
gtcggtctggcgggagaaattcgcccagtgccaagcggtcaggagcgtattatcgaagcg
gccaagcacggttttaaacgcgccatcgtaccgtttgccaatatgccgaagaaacccccc
gccaatatgcaggtgatgggcgcgaaaaagctatcggacgcgctggcgattctggatgat
ctgtaa
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