Dickeya parazeae: Dd586_0827
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Entry
Dd586_0827 CDS
T01138
Name
(GenBank) Sigma 54 interacting domain protein
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddc03000
]
Dd586_0827
Transcription factors [BR:
ddc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dd586_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
AAA
HTH_8
MCM
AAA_2
GAF_3
AAA_22
AAA_16
IstB_IS21
AAA_19
DUF8009
Diacid_rec
DUF815
Motif
Other DBs
NCBI-ProteinID:
ACZ75715
UniProt:
D2BT78
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All DBs
Position
916180..917709
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AA seq
509 aa
AA seq
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MTLSIDAFAHIAIELQQGLSTRDRFQRLLNSLRQLLCCDAAALLSYESQLLRPLATDGLA
PDVLGRRFRLSEHPRLEAIARAGDVVRFPADSQLPDPYDGLIPGQEALKVHACVGLPLFA
HHSLIGVLTIDGMDPHQFDHFSDEELRLIGAMASVALSNALLMEQLERQTVAPLPDVAPM
AEANADEMVGLSAPMQQLKKEVAIVADSDLNVLIMGETGVGKELVARAIHQGSRRADRPL
VYLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFELADNGTLFLDEIGELSLTLQAKL
LRVLQYGDLQRVGDDSSLKVNVRVLAATNRDLKQSVQEGTFRADLFHRLSVFPLSVPPLR
ARGQDIALLAGFFCERSRARLGLQRLSLSPQATQLLVRYPWPGNVRELEHVIYRATIVAR
AGGTSGDLVLRPEHLNLDGVLPDEPHPANAENTAPSWRGVSLRDATEHYQRQVISDTLAR
HQGNWSSCARELAVDSGNLHRMAKRLGIK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacgctatcgatagatgcctttgcgcacattgctattgagttgcagcaagggctttca
acccgcgaccgttttcaacgcctgctcaacagcctgcgccaattactctgctgtgatgct
gccgctttgctgagttatgaaagtcagttgctgcgcccgctggcaaccgatgggctggca
ccggacgtgctggggcggcgttttcggctctccgagcacccgcgtctggaagcgatagcc
cgggctggtgatgtggtgcggttccctgcggacagccagcttcccgacccttacgatggc
ctgatccccggtcaggaagcgttgaaagtgcacgcctgcgtgggcctgccgctgtttgct
caccattcgctgattggtgtattgaccattgacgggatggatccacaccagttcgatcat
ttcagtgatgaagagctacggctgattggcgcgatggcgtcggtagccctgagtaatgcg
ttattgatggaacaactggagcgccagaccgtagcaccactgccggatgtcgcgccgatg
gcagaggcaaatgctgacgagatggtggggttgtctgcgcccatgcagcaactgaaaaaa
gaagtggcgattgtggccgatagcgaccttaacgtgctgatcatgggggaaaccggggtt
ggcaaggaactggtggcgcgggccattcatcagggatcgcggcgtgcagaccgcccgctg
gtgtatctgaattgtgccgcgctgccggagtcagtggcggaaagcgaactgttcggccac
gtgaaaggggcgtttaccggcgcgatccatcatcgtactggtaaatttgagctggcggat
aacggtacgctgtttctggatgaaatcggcgaactgtcgttgaccttacaggccaagctg
ctgcgggtattgcaatacggcgatttgcagcgcgtgggtgacgacagcagcctgaaagtg
aatgtgcgtgtgctggcggcgaccaaccgggatttaaagcagtcggtgcaggaggggact
ttccgcgccgacttgttccatcgactgagcgtgtttccgctgtcggtgccgccgctgcgt
gcgcgtggtcaggatattgcgctgctggccggttttttctgtgaacgcagccgggccaga
ctcgggttgcaacgcctgtcattatcgccgcaagcgacccagttgctggtgcgttatcca
tggccggggaacgtgcgcgagctggagcatgtcatctatcgggcgacgattgtcgcgcgg
gcaggcggcacgagcggcgatcttgtcttacggccggaacacttgaatctggatggtgtg
ctgcccgatgagcctcatcctgctaacgcggagaataccgcgccgtcgtggcgtggcgtc
agcctgcgggatgctacagagcattaccaacgacaggtgattagcgacacgctggcgcgg
catcagggtaactggtcgtcctgtgcccgcgagctggcggtagacagcggcaatttacac
aggatggcaaaacggctggggataaaataa
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