Dickeya parazeae: Dd586_0944
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Entry
Dd586_0944 CDS
T01138
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ddc
Dickeya parazeae
Pathway
ddc03030
DNA replication
ddc03430
Mismatch repair
ddc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dd586_0944
03430 Mismatch repair
Dd586_0944
03440 Homologous recombination
Dd586_0944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddc03032
]
Dd586_0944
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_0944
Enzymes [BR:
ddc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dd586_0944
DNA replication proteins [BR:
ddc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dd586_0944
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dd586_0944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ACZ75830
UniProt:
D2BTX8
LinkDB
All DBs
Position
1045227..1048709
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHSA
GIKPIIGADFYLQSEELGDELAHLTVLAMNNEGYQNLTLLISRAYQRGYGADGPTIDREW
LVEHQAGILLLSGGRHGDIGKFLLRGNQVLVEQSVAFYQQHFPQRFYLELTRTGRPDEES
YLHAAIKLATAHGLPVVATNDVCFISQDDFEAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEDEMCELFADIPEALINTVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDYLVMCAKKGL
EERLAFLFPDEEVRAQRRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LGEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDQEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINARREKQGLEPVDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHETLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAEKMGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKIVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIDARNNGGYFRDLFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLADAMKSADQHAKAEAIGQADMFGVLAETPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYAGGVRLKDMHPTERGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEVMLFTDALEKYQHLLEQDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRQDARARLRFGAAWRVTPTD
VLLNDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggcgaagaccggcccgttggtaaaaaaagccgccgcgctggggatgccagcgctggct
atcaccgactttaccaacctgtgtgggctggtgaagttctatggcggcgcgcatagcgcc
ggtatcaagccgatcatcggggcagatttttatctgcagagcgaagagttaggcgacgaa
ctggcgcatctcaccgttctggcaatgaataacgaaggttatcagaacctgacgttgctg
atttcgcgggcttatcaacgcgggtatggtgctgatggcccgaccattgaccgggaatgg
ctggtggaacatcaggccgggatactgctgttgtccggtgggcgtcatggtgatattggc
aagtttttgttgcgtggtaatcaggtgctggtggagcagagcgtcgcgttttatcagcaa
cattttcctcagcggttttacctcgaactgacgcgtaccggccgaccggatgaagaaagc
tatctgcatgcggcaataaaactggcgaccgcgcatggcctgccggtcgttgcgactaac
gacgtttgctttatcagccaggatgattttgaggcacatgaaatccgcgtagcgattcat
gacggctttacgctggatgaccctaagcgtccccgtaattacagcccgcagcagtacatg
cgcagtgaagacgagatgtgcgagctgtttgccgacatccctgaagcgctgattaacacg
gtagagatcgccaaacgctgtaacgtgactattcggctcggtgaatatttcctgccgcaa
ttcccgaccggcgacatgtcgaccgaagactatctggtgatgtgtgccaaaaaagggttg
gaagagcgactggcgttcctgttcccggatgaagaagtacgggctcagcgccgcccggaa
tacgatgaacgtctggatatcgaactcggcgttatcaaccagatggggttccccggctac
ttcctgattgtgatggagtttatccagtggtcaaaggataacgacgtaccggtaggcccg
ggacgaggctccggcgcaggctcgttggtggcgtatgcactgaaaataaccgacctggac
ccgctggagtttgacctgctgttcgaacgtttcctcaacccggaacgtgtgtcgatgcct
gacttcgacgtcgacttttgcatggaaaaacgcgatctggtgatagaccacgtcgcggat
atgtatggccgtgatgcggtgtcgcaaatcatcaccttcggtaccatggcggctaaagcg
gtaatccgtgatgtgggccgtgtgttgggacatccgtatggttttgtcgacagaatttcc
aagctggtgccgcctgacccagggatgacgctggagaaagcctttgcggccgagccgcaa
ttaggtgagatctacgaggcggatgaggaagtcaaagcgctgatcgatatggcgcgcaag
ctggaaggggtgacccgtaacgccggtaaacacgccgggggggtggtgatttcgccgacc
aaaatcaccgattttgcgccgctttattgcgatcaggaaggcaatcacccggttacccag
tttgataagagcgacgtagaatacgccggtctggtgaagttcgacttcctcggcttacgc
acgttgaccatcattaactgggcgctagagatgatcaacgcccggcgcgaaaagcaaggg
ctggaaccggtcgatatcgccgccattccgctggacgacaagaaaagtttcgatatgctg
cagcgttcggaaaccacagcggtattccagcttgaatcgcgcggcatgaaagacctgatt
aagcgccttaagccggactgctttgaagacatgatagcattggtggcgctgtttcgtccg
gggccgctgcagtcggggatggtggataacttcatcgaccgtaagcacgggcgtgaagaa
atctcctacccggatattcagtggcagcatgaaacactgaaacccgtgctggaaccgacc
tatggtatcattctgtatcaggaacaagtgatgcagattgcccaggtactggcggggtat
accctcggtggcgcggatatgttgcgccgtgcgatgggtaagaaaaagcccgaagagatg
gctaaacagcgctcggtattcaaagagggtgctgagaagatgggcgtcgacggtgaactg
tcgatgaagatcttcgatttggtggaaaagttcgccggttacgggtttaacaaatcgcat
tctgctgcttacgcattggtatcgtaccagacgctgtggctaaaggcgcactacccggca
gagttcatggcggcggtgatgaccgctgatatggacaacaccgataagatagtcgggctg
gtggatgagtgctggcgtatgggattgaagatcctgccgccagacatcaacagcgggctg
taccatttccacgttaatgatgacggcgagattgtctatggcatcggcgccatcaaaggg
gtgggcgaggggccgatcgaagcaattatcgatgcgcgcaacaatggcggttatttccgc
gatttatttgatctgtgcgcccgtacggatattaagaagctgaaccgacgagtattggaa
aagctgattatgtccggcgcgtttgaccgtcttggtccccatcgtgcggcgctgatgaat
tcgctggcagatgccatgaaatccgccgatcagcatgcaaaggcggaggctatcggtcag
gcggatatgttcggcgtactggcggaaacccccgaacaggtggagcaatcctacagtacc
gtgccgccgtggccagagcaggtggtgctggatggtgaaagggaaacactggggttgtac
ctgaccggccaccccatcaaccagtatctgaaggaaatcgaacgttacgccggaggcgtg
cgtttgaaagacatgcatcccacggagcggggaaaaatgaccactgccgttgggctggtg
cttgccgcccgggtgatggtcaccaagcggggtaaccgcattggggtctgcacgctggat
gatcgttccggtcgtctggaagtgatgttgtttaccgatgcgctggaaaaatatcagcac
ctgctggaacaggatcgtattttgatagccagcggacaggtcagctttgatgacttcagc
ggtggacttaaaatgacagtcagagagttaatggatatcagcgaagcgcgtgaaaaatat
gcgcgtggacttgctatctcgctgactgacaggcaaattgatgaccagttgttaaaccgt
cttcgtcagtcgttggaaccccatcgatcggggacgattccggtgcatctttactaccag
cgtcaggatgcgcgcgcccggctacgttttggtgccgcatggcgtgtgacgcctaccgac
gtgttgctgaatgatttacgcaccctggttggtaatgaacaggttgagctggaatttgac
taa
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