Dickeya parazeae: Dd586_0988
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Entry
Dd586_0988 CDS
T01138
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_0988
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dd586_0988
Archaeal homologous recombinant proteins
Dd586_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
AAA_21
NTPase_1
TsaE
nSTAND3
GTP_EFTU
AAA_22
AAA_19
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACZ75873
UniProt:
D2BU21
LinkDB
All DBs
Position
complement(1093345..1097028)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTREPFISNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVSPSHNELMTRHTAECLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPKVELALCAD
GKILTDKVNDKLTMIADLTGLDFDRFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGLISERVFEKHKEAQTQLETLRAKVATLELLSDEQRQALEQQLDAIRQQEQSLSIHREE
VLAHQRWYDTLLQLQQAQKHVQQQHVAQQQLQQQSQPQLDKLERGEPAEKLRPRFDERGR
AQREKQRLSQQLTNVRQQISRQQEAQNQLKTQLEKALSARQQHADYRQQQETLINERILP
LDHHIATLQTQRNQQQQALDNLVEQQKMLITTLARLQRQQEQTRQRLEDIDTYRQQHSRH
QYLGSHIPLWQAQFPQQHKWQQDLHVVQEKVAQQQIQAEYLDQQRASLVEKQQAQQNATE
RAQQLLNDHLKQDEQMEAEHPLAGLRQQLARRMAERPERQQLATSAAVLQRLISQRTLLE
AQQLETLQRIQTLEELQVQQRRDYQNQASHLADLDKRHELELHIVSLEKERQQLQPGKEC
PLCGSTHHPAVERYQALRPSETQIRLHALRQEVETLKANVVQTETQLQLQKQHRQQQQNA
LESVQRDYESLRQQCQSVSEHLLVSFDPLQLPTLHQWIESCDAQEQSLQAQIASRERNQR
HIQESKDLLTSAQQLLAQTVQQLELNSQQQAALQASRDEQQLLLDKTERELARLHDSLSQ
TMETFGLTAPTLAQQEEWLRQRQTEWLRWQENEHEQNQCRPQLAALEAEIIASQRRLEET
ESAIKTGQLQLTETQRTLEQAQQQRWQLMGNQAVNDVLKQLRQVSQTLEQEGQQAQQQWQ
QGQSLQSRLSGEVDSLEQQSQHADTALQQLQAQFAEELAAAGFDDETAFRQALLDETERQ
QLVTLKERLNQRQQQVEALLQQANNTLENHLASRPESMPEGINDWDIRQLLSGLGDMVKV
EAERQGELRQQLTSDQQRRDKQRQLLEAIERGQHVCDDWGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLSRLHGRYLLQRKASDTLELQVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSAKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKTIGVISHVEAMK
ERIQVQIRVKKRNGLGISQLDSVYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgcctgaaaaacctcaactcattgcagggcgagtggaaaatc
gacttcacgcgcgagccatttatcagcaatagccttttcgccatcaccgggcctaccggt
gccgggaaaaccaccctgctggacgccatctgtctggcgctctaccaccagacgccgcgc
ctgaaggtcagccccagccataacgaattaatgacccgccacacggccgaatgtctggct
gaggtggaattcgaggtaaaaaatgtcgcttaccgcgcgttctggagccagcgtcgcgcc
cacaacagcccggaaggcaatctgcagccgcccaaagttgagctggcgttgtgcgctgac
ggcaagatcctgaccgacaaagtaaacgacaagctgacgatgatagccgacctcaccggg
ttggatttcgatcgattcaccaagtcaatgatgttgtctcaggggcagttcgccgcgttc
ctcaacgccgatgccaatcaacgggcagaattacttgaagaactgaccggcaccgatatc
tatgggttgatctccgagcgcgtctttgagaaacacaaagaagcacaaacccagttggaa
acgttacgggcgaaggtcgctacgctggaactactgagtgacgagcagcgtcaggcgctg
gaacaacaactggacgctatccgccagcaggagcaatccctgtcgatacaccgggaagaa
gtcctggcgcatcaacgctggtacgacacgctattacagctccagcaggcgcaaaaacac
gtacagcaacagcacgtcgcacagcagcaattacagcaacagtcccaaccgcaactggat
aaactagagcgcggcgaacccgcagaaaaactacgtccccgcttcgacgagcgtgggcgg
gcgcagcgggaaaaacaacgtctgagccaacagttgaccaacgtgcgccagcaaatcagc
cgccagcaggaagcccagaaccagttgaagacacagctggaaaaagcgctgtctgcacgc
cagcaacatgcggactaccgtcagcaacaagaaacactgattaacgagcggattttgccg
ctggatcatcacatcgccactctgcaaacacagcgcaaccagcaacagcaagcgttggat
aatctggttgaacagcaaaaaatgctgataaccacgttggccagattgcagcgccagcaa
gaacaaacgcggcaacggctggaagatatcgatacctatcgccagcagcatagccgccac
cagtatctgggcagccatattccactgtggcaggcgcaattcccgcaacagcataaatgg
cagcaggacctgcacgtcgtgcaggaaaaagtggcacagcagcagattcaggcggaatac
ctcgaccagcagcgcgcttcactggttgagaaacagcaggcgcagcaaaatgccactgag
cgcgcccaacaactgctgaatgaccatctgaagcaggatgaacagatggaggcggaacac
ccgctggcaggcttgcgtcagcagttggcacgacgcatggcggaacgcccggagcgtcag
caactggctaccagcgcagcggtactgcaacggttgattagccagcgcaccctactggaa
gcgcaacagctagagacgctacaacggattcaaacgctggaagaactgcaagtgcagcaa
cgtcgggattatcaaaatcaggccagccatctggcggatctcgataaacgtcacgagctg
gaactgcacatcgttagcctggaaaaagaacgccagcaattacaaccgggcaaagaatgt
ccgctgtgtggttcaacgcatcacccggcggtggagcgttatcaggcgttgcgcccctca
gaaacccagattcgattgcacgcgctgcgtcaggaagtcgagacgctgaaagccaacgtc
gtgcaaaccgaaacccagctccagttgcaaaaacagcaccgccagcagcaacaaaacgcg
cttgagagcgtccagcgcgattacgaatcgctgcggcaacagtgccagtcggtgagtgag
catttactggtgagcttcgatccactccaattgccgacgctacaccagtggattgaatcc
tgcgatgcacaagaacagtcgctacaggcgcaaattgccagccgtgagcgcaaccaacgc
catattcaggaaagtaaggatttactcacgtctgcccagcaactgctggcgcaaaccgtg
cagcagttggagctcaacagccagcagcaggccgcattgcaggcatcacgggatgaacag
cagctattactggataaaaccgaacgtgaattggcacgcctgcacgacagcctgagccaa
acgatggaaaccttcgggttgaccgcaccaacactggcacagcaggaagaatggttacgc
caacgccagacagaatggttacgctggcaggaaaacgagcacgaacagaatcagtgtcgg
ccgcaactggccgcgctggaagcggaaatcatcgccagccagcgacggctggaagaaacc
gaaagcgccatcaaaaccggccagttgcaactgactgaaacccagcgcacgctggaacag
gcccagcaacaacgctggcaattgatgggtaatcaggcggtcaacgacgtgctcaagcaa
ttgcggcaggtcagtcagacactggagcaggaaggccagcaagcacagcagcaatggcaa
caaggccagtcactgcaaagccgtcttagcggggaagtcgacagtctggagcaacaaagc
cagcatgccgatacggcgttacaacagcttcaggctcagtttgccgaagaactggccgcg
gccgggttcgatgacgaaaccgcgtttcgccaggccttgttggatgaaacggaacgccag
cagctcgtcaccttaaaagagcgcctgaaccagcgccagcagcaggtggaggctttgctg
caacaggcgaataacacgctggaaaaccatctggcgtcacgcccagaatccatgccggaa
ggcatcaacgactgggatattcgccagttgctttccggactcggcgatatggtaaaagtc
gaagccgaacgacaaggcgaattacgccagcaactgaccagtgaccagcaacgccgcgat
aagcaacgccaattactcgaggctatcgagcgaggccagcacgtgtgtgatgactggggc
tatctcaatcagttaatcggctcgcaaaaaggcgataaattccgccgttttgcacaagga
ttgacgctggatcacctggtgttcctggccaatcgtcagctctcgcggctgcatggacgc
tacctgttgcaacgcaaggcctccgacacgctggagttacaggtggtcgatacctggcag
gctgacgcggtacgcgatacccgaaccttgtccggcggcgaaagttttctggtcagcctg
gcgctggcgctggcattatccgacctggtgagcgcgaaaacccgtatcgactcgctgttt
cttgatgaagggttcggcacactggatggcgaaacgctggataccgcgctggacgtgctg
gacaacctcaatgcctccggcaaaaccatcggcgttatcagccatgtggaagcgatgaaa
gagcgcatacaggtgcaaattcgggtcaaaaagcgcaacggtctcggcatcagccagctc
gacagcgtctatgctgtgaaatga
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integrated database retrieval system
