Dickeya parazeae: Dd586_1137
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Entry
Dd586_1137 CDS
T01138
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00550
Peptidoglycan biosynthesis
ddc01100
Metabolic pathways
ddc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dd586_1137
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dd586_1137
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddc01011
]
Dd586_1137
Enzymes [BR:
ddc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Dd586_1137
Peptidoglycan biosynthesis and degradation proteins [BR:
ddc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Dd586_1137
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
DCD_C
PIR
Motif
Other DBs
NCBI-ProteinID:
ACZ76021
UniProt:
D2BUU0
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All DBs
Position
complement(1265537..1267447)
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AA seq
636 aa
AA seq
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MNIERKPFRDYTAEAALFVRRALVAFLGILLLSGILVANLYHLQIVRFDDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELIPEKVNNLEETLQALKPIIDLTDEDIDNF
RKERKRSRRFTSIPVKTGLNEVQVASFAVNQYRFPGVEVKGYQRRYYPYGSALTHVIGYV
SKINDKDLERLDQEGRLADYAATHDIGKLGIERYYEDVLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGKDITLTLDLNLQLYIEKLLEGSRAAVVVTDPKDASILAMVSTPSYDPNLFVD
GISSKTYHALLTDPNRPLINRATQGVYPPASTVKPYIAVSALSANVITPYTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNLTKAIEESADTFFYQVAYDMGIDRLSEWMTKFGYGQRTGI
DLSDKEESPGIMPTREWKMKRYKKPWYQGDTIPVGIGQGYWTATPIQMLKALTTLINDGQ
VQVPHLLGSTMENNTKVPFRQPQHQQIGDIRSGYWEIVKDGMYGVANRPNGTAHKFFADA
PYKVAVKSGTAQVFGLKENETYNANRIAERLRDHKLMVAFAPYNNPKVAMSIILENGGAG
PAVGTIVRQILDHIMLGDNNTSLPDAPPSPPGSETE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagaacgtaaaccctttcgtgactatacggctgaggcggccttgtttgttcgc
cgggcgctggtcgcattcctgggcattttgctgctaagcggtattctggtcgccaaccta
taccatctgcagattgtacgttttgacgattaccgtactcgttcaaatgaaaaccgtatc
aagctggtaccgatagcccccagccgtggcatcatttatgaccgtaacggtacgccactg
gcgctcaaccgtaccatttaccagttggagctgattcccgaaaaagttaacaacctggaa
gagacgctacaggcgctcaagcccattattgacctgaccgatgaagacattgataacttc
agaaaagagcgcaagcgctcacgccgcttcacctccattcccgtcaaaaccggactgaat
gaagtgcaggtcgcgagcttcgcggtcaaccagtaccgttttcccggtgtagaagtcaaa
ggctaccagcgccgctactatccttacggttctgcactcacccatgtcatcggctacgtt
tccaaaatcaacgataaagacctggaacggctggaccaggaaggcaggcttgcggattac
gccgccacgcatgatatcggcaaactcggcattgagcgttattacgaagatgtgctgcac
ggcaaaccgggttacgaggaagtggaagtcaataaccgcggccgcgtcatccgccagttg
cacgagcaacctccgcaagcgggtaaagatatcaccctgacactggatctcaaccttcag
ctttatatcgaaaaattgctggaaggcagccgagccgccgtggtggtcaccgatccgaaa
gacgcgtctattctggcgatggtatccacccccagctatgacccgaacttgttcgtagac
ggtatttccagtaagacttatcacgccctgctgaccgatccaaaccgcccgttgatcaac
cgtgcgacacaaggggtttacccaccggcttcaaccgtcaaaccctatatcgcggtttct
gcgctgagtgccaatgtcattaccccgtatacgtcgctgttcgatcccggctggtggcag
ttgcccggttcggaaaaacggtttcgcgactggaaaaaatgggggcatggtcgcctgaac
ctgaccaaagctattgaagaatccgcggataccttcttctatcaggttgcttacgatatg
gggatcgaccgtctgtcagaatggatgactaaattcggttacggtcaacgtacagggatc
gatttgtccgacaaagaagaaagtccgggcatcatgccgacgcgtgaatggaaaatgaag
cgttataaaaaaccatggtatcagggggatactatccctgttggtatcggtcagggttac
tggaccgctacgccgattcaaatgctgaaagcgctgacgacgctgattaatgacggtcag
gtacaagtaccgcacctgcttggcagtacgatggaaaacaacacaaaggtgccgttccgt
caaccacaacaccagcagattggtgatattcgttccggttattgggaaatcgtcaaagac
ggtatgtatggcgtggctaaccgcccgaacggtaccgcgcataaattcttcgccgatgcg
ccgtataaagttgcggtcaagtcagggacggcacaggtattcggcctgaaggaaaacgaa
acctataatgccaaccggattgccgagcggctacgtgaccacaaactgatggttgccttc
gccccctacaacaatccgaaagtcgctatgtccatcattctggaaaacggcggcgccggc
cccgccgtcgggaccattgtgcgtcagatcctcgaccatattatgttgggcgacaataat
accagcctgccggatgcgccgccgtcgccgccgggcagtgaaaccgagtag
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