KEGG   Dickeya parazeae: Dd586_1452
Entry
Dd586_1452        CDS       T01138                                 
Name
(GenBank) Sigma 54 interacting domain protein
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
ddc  Dickeya parazeae
Pathway
ddc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dd586_1452
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddc02044]
    Dd586_1452
Enzymes [BR:ddc01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Dd586_1452
Secretion system [BR:ddc02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Dd586_1452
SSDB
Motif
Pfam: T2SSE AAA_7 ABC_tran nSTAND3 AAA_22 AAA_16 Pox_A32 TsaE DUF87 Septin ORC-CDC6-like Zeta_toxin RNA_helicase VapE-like_dom ATP_bind_1 Myosin_head TrwB_AAD_bind NACHT PIF1 MobB NPHP3_N AAA_23 FtsK_SpoIIIE AAA_30
Other DBs
NCBI-ProteinID: ACZ76320
UniProt: D2BWT6
LinkDB
Position
complement(1650136..1651152)
AA seq 338 aa
MNAENLSLDFMKNQLFGEFLPLAGLTEIAINRPGEIHTKINGRWQRHESPVTLRQCHAFA
NALASWHDDNIDDTSPILSATLESGERIQAIIPPACERNTVSITLRKPSYAQKTHQSWIE
AGFYHRVTGQEQAESKDEELTRYYNNGDIPRFIEKAVEYGKTLFIVGETGAGKTTYMKTL
LHYIPSHLRLTTIEDNPEIRFYHHTNYVHLFYPAEATDEAIITPGRLIRANYRMNPDRIL
LAEIRGREAWDALKIIGSGHEGLITSLHAGSPEECIEGLIDRCYENPDCHNIPFDVLLRK
VLKSIDVIVSIDIHGDVRRMSDIYFKPVHLHHMKEIFR
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaacgctgaaaacctgtcgctggattttatgaaaaaccagttatttggtgaatttcta
cccctggcaggcctgacggaaatcgccattaaccgccccggcgagatccacaccaaaata
aacggtcgatggcagaggcatgaatcgccggtcaccttgcgccagtgccatgcctttgcc
aacgcgctggcctcatggcatgacgataatattgatgacacgtcgccaattctgtccgcc
acgctggagtccggcgaacgcattcaggccattattcccccggcttgcgagcggaatacc
gtgtccattacgctgcgcaaaccgtcatatgcgcagaaaacgcatcagtcgtggattgag
gcgggcttttatcaccgcgtaaccggtcaggagcaggctgaaagcaaggacgaggaactg
acccgctattacaacaacggggacatcccccgctttattgaaaaagccgtcgagtacggc
aaaacgctctttattgtgggggaaaccggcgcgggtaaaaccacctacatgaagacgttg
ctgcactatattccgtcgcatctcaggctgacgacaattgaagacaaccccgaaatccgg
ttttaccaccacaccaattatgtgcatctgttttacccggcagaggccaccgacgaggcg
attatcacccccggcaggctgatacgggcgaattatcgaatgaacccggacagaattctg
ctggcggaaattcgcgggcgggaagcgtgggatgcgctgaaaattatcggctccggccat
gaagggctaattacctccctgcacgcgggcagcccggaagagtgtattgagggactcatc
gaccgctgctatgaaaacccggactgccacaatatcccgttcgatgtgctgttacgcaag
gtgctaaaaagcattgatgtaatcgtcagcattgatattcatggcgacgtccgccggatg
agcgatatttattttaaaccggtacaccttcatcacatgaaggaaatattcagatag

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