Dickeya parazeae: Dd586_1984
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Entry
Dd586_1984 CDS
T01138
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00061
Fatty acid biosynthesis
ddc00071
Fatty acid degradation
ddc01100
Metabolic pathways
ddc01212
Fatty acid metabolism
ddc02024
Quorum sensing
ddc04146
Peroxisome
Module
ddc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dd586_1984
00071 Fatty acid degradation
Dd586_1984
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dd586_1984
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_1984
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ddc01004
]
Dd586_1984
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddc04147
]
Dd586_1984
Enzymes [BR:
ddc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dd586_1984
Lipid biosynthesis proteins [BR:
ddc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dd586_1984
Exosome [BR:
ddc04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dd586_1984
Exosomal proteins of breast cancer cells
Dd586_1984
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ACZ76841
UniProt:
D2BZT2
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All DBs
Position
2246114..2247817
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AA seq
567 aa
AA seq
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MPLKKYLGSDVLEKIWLARYPADVPAEIDPDRYASLIELFEQAVARYADQPAFINMGEVM
TFRRLEERSRAFAAYLQHQLKLKKGERVALMMPNLLQYPIALFGVLRAGLVVVNVNPLYT
PRELEHQLKDCGACAIVIVSNFAHTLEKVVYNTPVKHVILTRMGDQLAPAKGTLVNFVVK
YIKRLVPKYHLPDAISFRHVLQQGKKMPYVRPEVNNQDLAFLQYTGGTTGVAKGAMLTHR
NMQANLMQAKAAYGPVLHQGQELVVTALPLYHIFALTVNCLLFVELGGKNLLITNPRDIP
GMIKELAHYPFTAITGVNTLFNALLNNEAFGRLDFSTLRLSVGGGASVQQVVAERWEKLT
GIHLLEGYGLTESAPLVAGNPYDLQHYSGSIGLPVPSTDVRIINDDGQDVAPGEPGELWV
RGPQVMSGYWQQPAATHEVLKEGWLATGDIVTSNEQGFLKIVDRKKDMILVSGFNVYPNE
IEEVVVRHPKVSEAAAVGVSSETSGEAVKVFVVCRDPSLTVEELVSHCRRNLTGYKVPRL
FEFRSELPKSNVGKILRRELRNEQSAA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgccacttaaaaaatatctcgggagtgacgttttggaaaaaatctggttagcgcgttat
ccggcggatgtccctgcggaaattgacccggatcgttatgcttcgctgatcgaactgttt
gaacaagcggtagcgcgttatgccgaccagcccgcgtttatcaatatgggcgaggtcatg
acgttccgtcggttggaggagcgcagtcgtgcattcgccgcttatctgcaacatcaattg
aagttgaaaaaaggtgaacgcgttgcgctgatgatgcctaacctgctgcagtacccgatc
gcgctgtttggcgtgttgcgcgccgggctggtggtggttaacgtcaatccgctatatacg
ccgcgtgaactggagcaccagctcaaagattgtggtgcctgcgcgattgttatcgtttcc
aattttgcccatacgctggaaaaggtggtgtataacaccccggtgaaacatgtgattctg
acccggatgggcgatcagttggcaccagcaaaaggtacgctggttaactttgtcgttaag
tacatcaagcgactggtacccaagtaccatctgccggatgccatttcgtttcgccatgtt
ttgcagcagggcaaaaagatgccctatgtgcggccggaggttaataaccaggatctggct
tttctgcaatacacgggtggcacaaccggtgttgccaaaggtgccatgctgactcatcga
aatatgcaggctaacctgatgcaggccaaagcggcgtatggcccggtactccatcaagga
caagaactggtggtaacggcgttgccgctctatcacatcttcgcattgacggtgaattgc
ctgctgtttgttgaacttggcggcaaaaacctgctgatcaccaatccgcgtgatatcccc
ggcatgattaaagaattggcgcattatccatttaccgctattaccggggtgaatacgctg
tttaatgcgctgttgaataacgaggcgtttggtcggctggatttctccacgctgcgcttg
tcggtgggcggcggggcatcggtacaacaggtggtagcggaacgttgggaaaaactgacc
ggtatccacctgctggaaggctatgggctgacggaaagcgccccgctggtggcaggtaac
ccttacgatttacagcactacagcggcagtatcggtttaccggtaccgtccaccgatgtg
cgaatcatcaatgatgacggacaggacgtagcacccggtgagcccggcgagctgtgggtg
cgaggcccacaggtaatgtcgggttactggcagcaaccggccgccacgcacgaggtgctc
aaagaggggtggctggcaaccggtgacattgtcacgtcaaacgagcaaggctttctgaaa
atcgttgatcgcaagaaagatatgattttggtatccggttttaatgtttatcccaacgag
atagaagaagtcgtggttcgccatcccaaggtctccgaagccgctgccgttggcgtgtcc
agtgaaacgtcaggggaagcggtaaaagtcttcgtggtatgccgtgatccttcactgacg
gtggaggaattagtgagccattgccgccgtaacctcacggggtataaagtgccgcgattg
tttgagttccgaagcgagttgccaaaatccaacgtggggaaaattctccggcgtgagctg
cgtaatgagcagtcagccgcctga
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