Dickeya parazeae: Dd586_1985
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Entry
Dd586_1985 CDS
T01138
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddc03016
]
Dd586_1985
Enzymes [BR:
ddc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Dd586_1985
Transfer RNA biogenesis [BR:
ddc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dd586_1985
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACZ76842
UniProt:
D2BZT3
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All DBs
Position
2248013..2249134
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AA seq
373 aa
AA seq
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MNYQLITTDEGLSAVCALACAVSEVALDTEFVRTRTYYPQLGLIQLYDGDNLSLIDPLAI
SNWEPFRALLQNPQVTKYLHAGSEDLEVFLNAFGCLPSPFIDTQILAAFRGKPLSYGFAA
LVADYRQIVLDKSESRTDWLARPLSEKQCQYAAADVFYLLPVARVLVEETRLAGWMEAAL
DECQLLCQRRQDVLAPEMAYREIGNAWQLRGRHLACLQKLAAWRLRKARERDSAVNFIVR
EENLWQVARCLPGSLGELDSLGLSGPEIRYHGKTLLSLVAETASLSEADYPPAVVNLIDY
PGYKKAFRDIKALVQQCAEQSGLSAELLASRRQINRLLNWHWKLVSRENAPEMVTGWRGR
LFGDGLQTILADY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgattactaccgatgaaggattatcagcggtgtgcgcgttggcgtgc
gcggtgtccgaagtcgcgctggataccgagtttgtccgtacccgtacctactatccgcaa
ttggggctgatccagttgtatgacggcgataacctgtcgttgatagacccgctggcaatc
agcaactgggaaccgttccgggcgctgttgcagaacccgcaggtgactaaatacctgcat
gccggtagtgaagatttagaagtgtttttgaatgcgttcggttgcctgccgtcgcccttt
atcgatacccaaattctggcggcatttcggggtaagccactgtcttatggctttgccgcg
ctggtggcggattaccgccagattgtgctggataaaagcgagtcccgcaccgactggctg
gcgcgtccgctgagcgagaaacagtgccagtacgcggccgctgatgtgttttatctgtta
ccggtagccagagtactggtggaagagacccggttagctggctggatggaggcggcgctg
gatgagtgccagttgctatgccagcgtcgtcaggatgtactggcaccggagatggcgtat
cgggaaatcggtaatgcctggcaactgcgggggcgtcatctggcttgtctgcaaaaattg
gcggcgtggcgtctgcgtaaagcacgggagcgtgatagcgcggttaattttattgtccgt
gaggagaacctgtggcaggtagcccgttgccttcccggttcactcggtgaactggactca
ttaggtttgagcgggccggagattcgttatcacggcaagacgctgttgtcgctggtggca
gaaaccgcgtcgctgagcgaggcggattatccgcctgccgtggttaacctgatcgattac
cccggctacaagaaagcattccgtgatatcaaggcgctggtgcagcagtgcgccgagcaa
agtggtttatcagcagagttgctggcatcccggcggcagattaaccgtttgctgaattgg
cactggaaactggtatcgcgggagaacgcgccggaaatggtgactggctggcgcggccgt
ctgtttggggatgggttgcagaccattcttgccgattattaa
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