Dickeya parazeae: Dd586_2025
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Entry
Dd586_2025 CDS
T01138
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00541
Biosynthesis of various nucleotide sugars
ddc01100
Metabolic pathways
ddc01250
Biosynthesis of nucleotide sugars
Module
ddc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Dd586_2025
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ddc01005
]
Dd586_2025
Enzymes [BR:
ddc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Dd586_2025
Lipopolysaccharide biosynthesis proteins [BR:
ddc01005
]
Lipid A
Dd586_2025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACZ76881
UniProt:
D2BZX2
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All DBs
Position
2295690..2296544
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AA seq
284 aa
AA seq
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MNNKVVNIGSIPVGNHLPFVLFGGMNVLESRELAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKDTFGVKIITDVHEPQQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINIKKPQFISPGQVGNIVDKFREGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKQVSHGAPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGIAGLFIEA
HPEPNSARCDGPSALPLDKLEPFLQQMKAIDELVKNFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaagtggttaacatcgggtctatcccggtcggcaaccatctgccgtttgtg
ctgtttggcggcatgaatgtgcttgaatcccgcgaactggcgatgcggatttgtgagcac
tatgtcacggtgacgcagaaactgggcatcccctatgttttcaaggcttcctttgataaa
gcgaaccgctcttccatccactcttaccgtggtccaggtctggaagaagggatgaagatt
ttccaggagctgaaagacaccttcggcgtgaaaatcattaccgatgtgcacgaaccgcag
caggctcagccggtttctgaggttgttgatgttattcagttaccggcctttctggcccgc
cagaccgatctggtcgaggcgatggccaaaacgggcgcggttatcaatatcaaaaaacca
cagttcattagccccggtcaggtcgggaatatcgtggataaattccgcgaaggtggcaat
gatcaggtgattttgtgcgatcgcggcagtaactttggctacgacaatctggtggtggac
atgctgggcttcaatgtcatgaaacaggtttcgcatggtgcgccggtgatttttgatgtc
acgcatgcactgcaatgccgtgatccgtttggtgcggcatcaggtggacgccgtgctcag
gttgctgaactggcgcgtgcgggtatggcggtcggcatcgctgggttgtttattgaagct
cacccagagccgaacagcgccagatgtgacggtccgtcggcattgccgctggataaactg
gaaccattcctgcaacagatgaaagcgattgatgagcttgttaaaaatttcccggaattg
gataccagtaattga
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