Dickeya parazeae: Dd586_2249
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Entry
Dd586_2249 CDS
T01138
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ddc
Dickeya parazeae
Pathway
ddc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dd586_2249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddc02000
]
Dd586_2249
Enzymes [BR:
ddc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Dd586_2249
Transporters [BR:
ddc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Dd586_2249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
MMR_HSR1
APS_kinase
AAA_25
nSTAND3
AAA_15
NB-ARC
DUF87
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
ACZ77100
UniProt:
D2C129
LinkDB
All DBs
Position
complement(2539275..2541023)
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AA seq
582 aa
AA seq
DB search
MINDKDLSTWQTFRRLWPMISPYKAGLAVAAVALVVNAAGDTLMLSLLKPLLDDGFGKAD
RSVLVWMPLAIIGLMIMRGISSYVSSYCVAWVSGKVVMNMRRRLFSHIMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSNALVTVVREGASIIGLFVLMFWYSWQLSLILVLIAPFVSY
SMRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQSVEAERFDAVSNRMRQQ
GMKMVSASSISDPVVQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMFTLMRPLKS
LTNVNAQFQRGMAACQTLFTILDMEQEKDTGTRVLEHAKGNIEFRDVNFAYPGKETLALK
NISLHILPGKTVALVGRSGSGKSTIANLITRFYDIQSGEILLDGCDLRDYTLPSLRSQVA
LVSQNVHLFNDTIANNIAYACGDRYSREDIERAAKMAHAMDFIGKLDQGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILVLDEATSALDTESERAIQAALDELQKNRTALVIAHRLS
TIENADEILVVEDGQIIERGQHAELLARNGAYAQLHKLQFGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgataaagatctctccacatggcagacgtttcgtcgcctatggccgatgatc
tccccctataaagccgggctggccgttgcggctgtggcgctggtggtcaacgccgcaggc
gatacgctgatgctgtccctgctcaagccgttgctggatgacggattcggcaaggctgat
cgcagtgtactggtgtggatgccgttggctatcatcgggttgatgattatgcgcggcatc
tccagttatgtgtccagttattgtgtggcctgggtatcgggcaaggtggtgatgaacatg
cgtcgtcggctgttcagccacatcatggggatgccggtgtccttttttgatcagcaatct
accggcacattgctatcgcgtatcacctatgattccgagcaggtggcctcctcatcgtca
aacgcgctggtaaccgtagtacgtgaaggggcgtcgatcattggcctgtttgtgctgatg
ttctggtacagctggcagttatcgctgattttggtgctgattgcaccgttcgtttcctac
agcatgcgggtggtgtcaaagcgttttcgtagtatcagcaaaaatatgcaaaacaccatg
gggcaggttacgaccagcgctgagcagatgctgaaagggcacaaagaagtgctgattttt
ggcgggcagtccgtcgaagcggagcgtttcgatgccgtcagcaatcgcatgcgtcagcag
ggcatgaaaatggtatccgcgtcttccatttctgacccggtggtgcagttgattgcttct
ctggcgctggcattcgtgttatatgccgccagtttcccgtcggtgatggaaacgttaacg
gccggtaccatcacggtagtgttctcctccatgtttacgctgatgcggccattgaagtcg
ctcactaacgtcaatgcgcagtttcagcgtggtatggccgcctgccagaccctgtttacc
attctggatatggagcaggagaaagacaccggtactcgtgtactggagcacgctaaaggc
aatatcgaattccgtgatgtcaacttcgcctatcctggtaaagaaacgctggcgttaaaa
aatattagcctgcatatcctgcccggaaaaactgtggcgctggtagggcgctcaggttct
ggcaagtcgaccatcgccaatctcattacccgtttttacgatatccagtctggcgaaatt
ctgttggatggatgcgatttacgcgattatacgctgccatcattacgcagccaggtggcg
ttggtatcgcagaatgttcacctgtttaacgataccattgccaacaatattgcctatgcc
tgcggcgatcgctacagccgtgaggatatcgagcgggcggccaaaatggcccacgcgatg
gatttcatcggcaagctggatcaggggttggataccgtcatcggtgagaacggggtgtta
ctgtctggcggtcaacgtcagcgtatcgctattgcccgtgcgctgttgcgggattgcccg
attctggttctggatgaggcgacatcggcgttggataccgagtcagagcgcgctattcag
gcggcattggacgaattgcaaaagaaccgtactgcgctggttattgcccaccgtttgtcc
acgattgaaaatgcggatgaaattctggtggtagaggatgggcagatcatcgagcgtggt
cagcatgctgagttgctggcgcgaaacggggcctatgcccagctccacaaattgcagttt
ggcgcatga
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