Dickeya parazeae: Dd586_2362
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Entry
Dd586_2362 CDS
T01138
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ddc
Dickeya parazeae
Pathway
ddc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dd586_2362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_2362
Enzymes [BR:
ddc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Dd586_2362
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dd586_2362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACZ77213
UniProt:
D2C1R9
LinkDB
All DBs
Position
2672691..2673548
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AA seq
285 aa
AA seq
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MKYVGAHVSASGGVDQAVARAHDIGATAFALFTKNQRQWQAAPLTAEVIDRFQAACARYH
FTPAQILPHDSYLINLGHPDDEALGKSQAAFVDEMMRCQQLGLTLLNFHPGSHLRQIDES
TCLRRIAQSINLALEATSGVTAVIENTAGQGSNLGFRFEHLAEIISQVEDKSRVGVCIDT
CHAFAGGYDLRTEADCERTFAELERIVGFSYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDSRFDGIPLILETINPDIWAQEIAWLKSQQSPASLL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgtcggagcccacgtcagtgcatctggcggcgtggatcaggcggttgcccgc
gcccacgacatcggcgccaccgcgttcgcgttgtttaccaaaaaccagcgccaatggcag
gccgcgccattaacggcggaggtgattgaccgttttcaggctgcctgcgcccggtatcac
ttcaccccggcgcaaatactgccgcacgacagctatctgatcaatctggggcatcccgat
gacgaggctttaggcaaatcccaggcggcatttgtcgacgaaatgatgcgttgccagcaa
ctggggctgacattgctgaattttcatcccggtagccacctgcgtcagatagacgaaagc
acctgtctgcgccgtatcgcccagtccatcaatctggcgttggaagcgaccagcggtgtc
accgcagtgatagaaaacaccgccggtcaagggagcaacctggggtttcggtttgaacat
ctggcggaaatcatcagtcaggtggaagacaaaagtcgggtcggcgtctgtatcgatacc
tgccatgcgttcgctggcggttatgacctgcgcaccgaggctgactgcgaacgtaccttt
gctgaactggagcgtatcgtcggtttcagctatttacgcggtatgcacctgaatgacgcg
aaaagcgagtttaatagtcgggtggaccgtcaccacagtctgggcgaaggcaacatcggt
aaaaccgtgttcagctatattatgcgcgactcgcgctttgacggcattccactgattctg
gaaaccatcaacccggatatctgggcgcaggaaatcgcctggttaaagtcacagcaatcg
ccagccagcctcctctga
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