Dickeya parazeae: Dd586_2379
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Entry
Dd586_2379 CDS
T01138
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddc03009
]
Dd586_2379
Enzymes [BR:
ddc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Dd586_2379
Ribosome biogenesis [BR:
ddc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dd586_2379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Herpes_ORF11
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
ACZ77230
UniProt:
D2C1T6
LinkDB
All DBs
Position
complement(2690764..2691462)
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AA seq
232 aa
AA seq
DB search
MRLDKFLSQQLGISRSLIVRELRAQRVTVNGEVVKSGAFKLLPEHEVAFDGNVLEQQNGP
RYFMLNKPQGYVCSTDDPDHPTILYFIDEPVAHKLHAAGRLDIDTSGLVLLTDDGQWSHR
ITSPKHHCEKTYLVTLEQPLAADTAEKFQAGVQLHNEKNLTRPATLEVLSEHQVRLTITE
GRYHQVKRMFAAIGNHVVALHRERIGAITLDDTLEPGEYRPLTQEEVDSFGQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggataaatttctttcccagcagttgggaatcagccgttctctgatagtgcgc
gaactgcgtgcacagcgtgtgacagtaaacggtgaggtagtaaaaagcggggcattcaaa
ctgttgccagagcatgaagtggcgttcgacggcaatgtgctcgagcagcaaaatgggccg
cggtatttcatgctcaataaaccgcagggttatgtgtgctcaaccgacgatcctgaccac
ccgacgattttgtatttcattgacgaaccggtcgcgcacaagttgcatgctgccgggcgg
ctggatatcgacaccagcggtttagtgctgctgaccgatgatgggcagtggtcacaccgg
attacctcgccaaagcaccattgtgaaaaaacctatctggtgacgctggagcagccactg
gcggccgatacggcggaaaaatttcaggcaggtgttcaactgcataatgagaagaaccta
acccgcccggccaccctggaggtgctgtctgaacatcaggtccgtctgactatcactgaa
gggcgttaccatcaggtgaaacgtatgtttgcggcgatcggcaaccacgtggtggcgctg
catcgtgaacgtattggtgccattacattggatgacacgctggagccgggtgaataccgg
ccgttgacacaggaagaagtcgacagtttcgggcagtaa
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