Dickeya parazeae: Dd586_2381
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Entry
Dd586_2381 CDS
T01138
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_2381
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Dd586_2381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
DUF7577
Zn_Ribbon_1
AAA_16
AAA_22
SLFN-g3_helicase
Zn_ribbon_3
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
ACZ77232
UniProt:
D2C1T8
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All DBs
Position
2691978..2693738
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AA seq
586 aa
AA seq
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MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYCALGLPADIFAAGLNQRDSTGKVVFGSVQSVARHPDQFDDAFSLLIIDECH
RISDDENSQYQQIIQHLQQANPRLRLLGLTATPYRMGRGWIYQYHYHGMIRGDESCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSHGLFSEVDLNREVKRQQRVTPQ
IVRQIIEYTADRRGVMIFAATVEHAREIEGLLPPGEAALISGETPTPQRDALISAFKQQQ
LRYLVNVSVLTTGFDAPHVDAIAILRPTESVSLYQQIIGRGLRLFPGKTDCLILDYAGNP
FDLYTPEVGNSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGSVIEHYGRRCQGWQEDEHG
KRQQCDYRFRFKSCPHCGAENDIAARRCQTCDALLVDPDDMLKAALKLKDALVLRCSGMQ
LQHGTDAKGEWLRITYHDEDGADVSERFRLHTSAQRNAFNHVFLRVHQRAPGVPFQWQRA
DDVVAQQALLRAPDFVVARLQGKYWQVREKIFDYQGRYRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacactgcgcccgtaccagcaagaagcggttgacgctacccttgcctatttt
cgccagcacaccgctccggcggtgatcgtcttacccaccggcgcaggcaaaagcctggtg
attgccgaactggcgcggctggcgcgtgggcgggtattggtactggcgcatgtcaaagaa
ctggttgagcagaatcacgcgaaatattgcgcgttgggtttaccggcggacattttcgcc
gccgggctcaaccagcgtgacagcacgggcaaagtggtgttcggcagtgtgcagtcggtc
gctcgccatcctgaccaattcgacgatgcgttttcgctgctgattatcgatgagtgtcac
cgcattagcgacgatgaaaacagccagtatcagcaaattattcagcacttgcagcaggcc
aatccccggttacggctactggggttaacggcaacgccttaccgcatgggtcgggggtgg
atctatcaataccattaccatggcatgatccgtggtgacgaaagctgtttgttccgcgac
tgtatctacgaattgccgctgcgttacatgatacgccatggttttctggtgccaccggag
cgactcgatatgccagtggtgcagtacgatttcagccagttagccgcccgcagtcatggc
ttgttcagcgaggtggacttaaaccgggaagtaaaacgtcagcagcgggtcacgccacag
atagtccgccaaattatcgagtacaccgccgatcggcgcggcgtgatgattttcgccgcc
acagtggagcatgcccgggaaatagaaggcttgttaccgcctggtgaagcggcgcttatc
agcggggaaacccctaccccacagcgggacgcgctcatcagcgccttcaaacagcagcaa
ttgcgttatctggtgaacgtgtcggtattgacgaccggttttgacgcaccgcatgtcgac
gctatcgccattttacgcccgacggaatccgtcagcctctatcagcaaatcatcgggcgt
ggcttgcgtctgtttcccgggaaaaccgactgcctgatactcgattatgctggtaatccc
tttgacctctacacgccggaagtcggcaacagcaaaccacacagtgacagccaacctgtg
caggtattctgtccgcaatgcggtttcgccaacctgttctgggggaaatgcaccgatgac
ggtagcgtaatagaacattacggccgccgctgtcagggctggcaggaggacgaacacggc
aaacgccaacagtgcgactaccgttttcgcttcaagagctgcccgcattgcggcgcggaa
aatgatatcgccgcccgacgctgccagacctgcgatgcgctattggtcgacccggatgac
atgctgaaagccgcgttgaagcttaaagatgcactggtgctacgctgtagcgggatgcaa
ctgcaacacggtaccgatgccaaaggcgaatggctgcgtatcacctatcacgacgaagac
ggtgccgatgtcagcgagcgctttcgcctgcatacatcagcccagcgtaacgcgtttaac
catgtgtttctgcgggtgcatcagcgtgcgcccggcgtcccgttccagtggcaacgcgcc
gacgacgtggtggcccagcaggcgttgctgcgggcaccggacttcgtggtggcacgtctg
cagggaaaatactggcaggtgcgggaaaaaatcttcgattatcagggccgctatcgccgg
gcaaacgaactgcgcggctag
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