Dickeya parazeae: Dd586_2480
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Entry
Dd586_2480 CDS
T01138
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ddc
Dickeya parazeae
Pathway
ddc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dd586_2480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_2480
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dd586_2480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dd586_2480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
UvrD-helicase
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ACZ77329
UniProt:
D2C2G5
LinkDB
All DBs
Position
complement(2787634..2789646)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKAFKLHSAFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YSRNDQAFSRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGHIVQTVPR
YTIYPKTHYVTPRERILQAMEEIKVELAERRQVLLANNKLLEEQRLAQRTTFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PVLEVRPVTTQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYADRITPSMERAINETQRRREKQQAYNEQHGIVPQGLNKKIGDILQIG
QSVNGKGKGRGKKAAEPAARYQQLSPKALDQKIRELESQMLTHAQNLEFEEAARLRDEIH
ALREQFIAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaactgcattctgcctttaagcccgcaggcgaccaacctgaagcg
atacgtcgtctgaaagaggggctggaagacggcctggcgcatcagacgttgctgggggta
acgggttccggcaagacgtttaccatcgctaacgtgattgcggacctcaaccggccgacc
atggtgctggcgccgaataaaaccctggccgcgcagttgtatggcgaaatgaaggagttt
tttccggacaacgcggtggagtatttcgtgtcctactacgattactaccagcctgaagcc
tacgtgccgagctccgatacctttatcgagaaggacgcctcggttaacgaacatatcgag
cagatgcggttgtctgcgactaaggccttgctggagcggcgtgacgtggtggtggtggcg
tcggtatcggccatttacggtctgggcgatccggacctctacctgaagatgatgttgcac
ctgacgcaaggcatgctgattgatcagcgcgctattttgcgtcggctggcggagttgcaa
tattcccgtaacgatcaggcctttagccgtggcaccttccgggttcgcggtgaggtcatc
gatatttttccggcggaatccgatgagatagcgctgcgggtcgagttgtttgacgaagaa
gtggagcggctgtcgctgtttgacccgctcaccggccacatcgtgcaaaccgtaccgcgt
tacaccatttacccgaaaacccactatgtgacgccacgcgaacgcattttgcaggcgatg
gaagagatcaaggtcgaactggcagaacgccgtcaggtgttgctggccaacaataaactg
ttggaagagcagcggctggcgcagcgcaccaccttcgatttggaaatgatgaatgagctg
gggtattgctccggcattgaaaactactcccgctttctgtctggacgcggccccggcgaa
ccgccgccaaccttgtttgattacctgcccgccgatgggctgctggtgattgacgaatcc
cacgtgactatcccgcaactggggggcatgtatcgtggtgaccgggcgcgtaaagaaacg
ctggtggaatacgggtttcgcttaccctcggcgctggataaccggccgatgaagtttgag
gaattcgaagcgctggcaccgcagaccatttatgtctcagcgacgccgggtaattacgaa
ctggaaaaatctggcggcgagataatcgatcaggtggtgcggccgaccggcctgctggac
ccggtgctggaagtgcgcccggtcaccacgcaggtggacgatttactgtcggaaatccgc
aagcgggcggtcattaacgagcgagtgctggtcaccaccctgactaaacgtatggcggag
gacctgaccgagtatctggaagagcacggcgagcgggtacgctacctgcactcggatatc
gataccgtggagcgggtagaaatcatccgtgatttgcgactgggcgaattcgacgtgttg
gtggggatcaacctgctgcgtgaagggctggacatgccggaagtgtcgctggtggcgatt
ctggacgccgacaaagaaggcttcctgcgctcggagcggtcgctgattcagaccattggc
cgtgcggcacgtaaccttaacggcaaggcgattttgtacgccgacaggattacgccgtcg
atggagcgcgccatcaatgaaacccaacgccgccgtgagaaacagcaggcctacaatgag
cagcatggcattgtgccgcaggggctgaacaagaagattggcgacattttgcagattggt
cagtctgttaacggcaagggcaaaggtcgcggcaagaaagcggcggaaccggcggcccgg
tatcagcaactgtcgccgaaagcgttggatcagaaaatccgtgagctggaaagccagatg
ctgacccatgcacagaatctggagtttgaagaggccgcccgtctgcgcgacgaaatccat
gcgctgcgcgaacagtttattgcggcatcctga
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