Dickeya parazeae: Dd586_2629
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Entry
Dd586_2629 CDS
T01138
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddc03000
]
Dd586_2629
Transcription factors [BR:
ddc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dd586_2629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF_3
GAF
AAA_5
Mg_chelatase
AAA_2
AAA_16
HTH_8
AAA
AAA_19
AAA_3
PhoH
HTH_50
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACZ77473
UniProt:
D2C392
LinkDB
All DBs
Position
complement(2961093..2963261)
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AA seq
722 aa
AA seq
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MATRLTDSPSRLSILWQDALLKISQSLLQQRTLPDLLQCLDGVSFSVVRFGRVNVILLDP
LRNQMHFYRHDRDSGRTLCSEEAILLANGPGGVVWSTQTVLHCDRTHFQRDFPHLTDLPA
YAGLSDYCQLPLRGTQRVLGGVEFLKTDGSRFTDSELDFFQALAGVVALVVENIREREQV
LQEEERLRHERDHLRILVDVTNTVISKLELKALALEVSREIHRFFGIDFIALVLKDGEEQ
GNPLKYLATVYPTSGAPKTVQGEVDRAQTLADGVMAQHQPQLVEVPTCLAAEDPRPLCQW
FDRELSHVCLLPLVFGNRTLGVLELAHRTALAVSEADLRLLRQIAARIAIALDNALAYEQ
ITRLKDSLIHENFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVAMVAASDSTVLI
LGETGTGKELIARAIHSLSQRKSQRMVKMNCAAIPSGLLESDLFGHEKGAFTGATSLRQG
RFELADNSTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKIIPVNVRLIAATNRDLKQ
MVADREYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDMLR
QLSRLPWPGNVRELENVVERAVILTRGTTLNLHMDELQHHLSPLDVPKPSHHDIMPMVDP
TPGPLEADDESERERIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGISAREIEG
IS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgactgacagactccccgtcccggctgtctattctctggcaggatgccttg
ctgaaaatttctcagtcgctgttgcaacagcgcaccctacccgatctgctgcagtgcctg
gacggtgtgtcgttctcggtggtgcggtttggtcgcgttaatgtgatcctgcttgaccca
ttacgtaaccagatgcatttctaccgccacgatcgtgattccgggcggacgctgtgcagc
gaagaggcgattttactggccaatggccccggcggggtcgtgtggagcacccaaaccgtg
ctgcactgtgaccggacacactttcagcgcgattttccccatctgaccgatctgcccgcc
tacgccggattaagcgactattgccagttgccgctgcgtggcacccagcgtgtactgggc
ggggtcgagtttctcaagaccgacggcagccgctttactgacagcgaactggatttcttt
caggcgctggcaggcgtggttgcactggtggtggaaaatattcgtgagcgtgagcaagtg
ttgcaggaagaagagcgattgcgccacgagcgggatcacctgcgtattctggtggatgtc
accaataccgtgatttccaaactggagctgaaagcgctggcgctggaagtgtcgcgcgag
atccaccgcttcttcggtattgattttatcgcactggtgctgaaagacggcgaagagcaa
ggcaacccactgaagtatcttgccacggtgtatccgacttccggcgcgccgaaaacggta
caaggcgaggtggatcgagcgcaaacgctggctgacggcgtgatggcgcaacatcagccg
caactggtagaggtgccgacttgtctggcggccgaagacccgcgtccgctttgtcagtgg
tttgaccgtgagttgtctcatgtgtgtttgttgccgctggtattcgggaaccgcacgctc
ggtgtgctggagctggctcatcgcaccgcgcttgccgtgagcgaggcggacctgcggctg
ctgcggcagattgccgcccgcatcgccattgcgttggataacgcactggcctatgagcag
attacccggctgaaggattcgttaatccatgaaaacttctacctgaccgagcaactgact
gaacacattcatcagcgtagcggtgatgagtttggcgagatcatcggccgtagcgcggcg
attcgacaggtactggaacaggtagcgatggtcgccgccagtgacagcacggtgttgatt
ctgggggaaacgggcaccggtaaagagttgattgcccgcgctattcatagcctgagccag
cgcaaatcacaacgtatggtgaaaatgaattgcgcggctattccttctggcctgttggaa
agcgacctgttcgggcatgaaaaaggggcgttcaccggcgcgaccagcctgcggcagggg
cgctttgagctggcggataacagcacgttatttttagatgaggtcggggatattccgctg
gagttgcagcctaagttactgcgggtgttacaggagcgggaaatagagcggttgggcggc
agtaagatcatcccggtgaatgtgcggttgattgccgcgactaaccgtgacctaaaacaa
atggtggcggaccgtgaataccgtagcgatctttactatcgcctcaatgtgttccccatc
gttattccgccgttgcgtgagcggccggaggacattccgctgttggtgaagttttttacc
cgcaagatagcccgtcgtatgaaccgtactatcgacagtatcccttccgatatgctgcgt
cagttgagtcgcttgccgtggcccggcaacgtgcgggaactggaaaatgtggtggagcgg
gcggtgatcctgacacgcggcaccacgctcaacttgcatatggatgaactccagcaccat
ttgtcgccgctggatgtgcccaagccctcgcaccacgatatcatgccgatggttgaccct
acgcctgggccgctggaagccgatgacgagtcagaacgcgagcgcatcatccgggtttta
cgggaaaccaatgggattgtcgcaggcccgaaaggtgcggcggcacgccttggccttaaa
cgcaccacattattgtcgcgtatgcagcgtatggggatttccgcccgggaaattgaaggg
atttcgtaa
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