Dickeya parazeae: Dd586_3083
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Entry
Dd586_3083 CDS
T01138
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00040
Pentose and glucuronate interconversions
ddc01100
Metabolic pathways
ddc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dd586_3083
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_3083
Enzymes [BR:
ddc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dd586_3083
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Motif
Pfam:
Pectate_lyase_4
DUF5749
Motif
Other DBs
NCBI-ProteinID:
ACZ77918
UniProt:
D2BU71
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Position
3505901..3507079
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AA seq
392 aa
AA seq
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MNTSSGRSFTRSSTYLLATLIASVMTSGVSAAELINNNALESAPSVGWASQNGTTTGGAA
ASSDNIYIVTNISEFTNALSAGTAAKIIQIKGTIDISGGTPYKDFADQKARSQIMIPANT
TVIGIGSDAKFLNGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDGMNIT
NGAHHVWIDHVTITDGSFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKT
MLIGHSDTNSAQDKGKLHVTLFNNVFNRVTERAPRVRYGSIHSFNNVFKGDVKDPVYRYL
YSFGIGTSGSVLSEGNSFTIANLSASKACKIVKKFNGSIFSDNGSTLNGSAVDLSGCGFS
AYTSAIPYVYTVQPMTAALAQSITDKAGSGKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcatcaggacgttcttttacccgctcttcaacctatctgctggccaccttg
atagctagcgtgatgacctctggtgtgtccgccgctgagctgattaacaataacgcgctg
gaatctgctccctctgtcggctgggcatcacaaaacggcacgaccaccggcggagcggcc
gcaagcagtgacaatatctacatcgtcacgaatatcagcgaattcaccaatgcattaagt
gcaggtaccgcggcaaagattatccagataaaagggacgattgatatcagcggcggtaca
ccttacaaagactttgccgatcaaaaagcccgcagccagattatgattcccgccaatacc
accgttatcgggattggtagcgacgcaaaattcctcaatggttcgctgattattgatggc
actgacggtaccaacaacgtcatcattcgtaacgtctatattcagacgccgattgatgtc
gagccgcactacgaaaaaggtgatggctggaatgccgagtgggacggcatgaatatcacc
aatggcgcgcaccatgtgtggattgatcacgtcaccatcactgacggcagcttcactgat
gacatgtacaccaccaaagatggcgaaacctatgtgcagcatgacggcgcattggatatc
aaacgtggctccgactacgtgaccatctccaacagccttatcgatcagcacgacaaaacc
atgctgattggtcatagcgacaccaactccgcccaggacaaaggcaagctgcacgtcacc
ctgtttaataacgtgttcaaccgcgtcaccgagcgcgctcctcgcgtacgttacggcagc
attcacagtttcaataacgttttcaaaggtgacgtaaaagatccggtttaccgctacttg
tacagctttggtatcggtaccagcggcagcgtgttatcggaaggcaatagcttcactatc
gcgaatctgagcgccagcaaagcctgcaagattgtgaagaaattcaacggctccattttt
tcagataacggttccacactaaacggcagcgcagttgatctatcgggttgtggtttcagc
gcctataccagtgccattccttacgtttataccgttcagccaatgactgctgcactggca
caatccattacggataaagccggctcaggcaaactgtaa
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