Dickeya parazeae: Dd586_3084
Help
Entry
Dd586_3084 CDS
T01138
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00040
Pentose and glucuronate interconversions
ddc01100
Metabolic pathways
ddc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dd586_3084
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_3084
Enzymes [BR:
ddc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dd586_3084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACZ77919
UniProt:
D2BU72
LinkDB
All DBs
Position
3507518..3508735
Genome browser
AA seq
405 aa
AA seq
DB search
MNNLSMSSVSRQKIAGRSALGTTKNVLAAVIVAALMVSTASAASLQTTKATETASTGWAT
QSGGTTGGAKAASAKIYAVKSISEFKAALNGNDSSPKIIQVTGAIDISGGKAYTSFDDQK
ARSQISIPSNTTIIGIGNQGKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYETGDGWNA
EWDAAVIDNSDHVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDYVTVSNSR
FELHDKTILIGHSDNNGSQDAGKLRVTFHNNVFDRVGERTPRVRFGSVHAYNNVYIGDVN
HKAYRYQYSFGIGTSGNLLSESNAFTIDNLKKISGRDKECSVVKAFNGKIFSDKGSIING
ASYNLNGCGFGFSAYTAKIPYKYSAQTITTSLANSISSNAGYGKL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttatctatgtcttctgtttcaagacagaaaatagccggacgttctgcactt
ggcaccacgaaaaacgtgttagctgccgtcatcgtcgctgcgctgatggtatccaccgct
tccgctgccagcctgcaaaccaccaaagcgacagaaaccgcctctaccggctgggcgaca
caaagcggcggcaccaccggcggcgctaaagcggcatcagccaaaatctatgcggtgaaa
agtatcagcgaatttaaagcggcgttaaatggaaacgattcgtcacccaagattattcag
gtaactggcgcgattgatatcagcggtggcaaagcctacaccagctttgatgaccaaaag
gcccgcagccagatcagtattccgtccaataccaccattatcggtatcggcaaccaaggt
aaattcaccaacggttcgctggttatcaaaggggtgagcaacgtcatcctgcgtaatctg
tatatcgaaacgccggtggacgttgcgccgcattatgaaaccggcgatggctggaacgcc
gagtgggatgccgccgtgatcgataactcggatcacgtctgggtcgaccacgtgaccatc
agcgatggcagctttaccgatgataaatacaccaccaaaaatggcgaaaaatatgtccag
catgacggcgcgctggatatcaagaaaggctctgactacgttaccgtttccaacagtcgc
ttcgaactgcatgacaaaaccattctgatcggccacagcgacaacaacggctcacaagat
gccggtaaactgcgcgtcaccttccacaacaacgtgtttgaccgcgtcggtgaacgaacg
cctcgggtacgtttcggcagcgtgcatgcttacaacaatgtctacatcggcgacgttaac
cacaaagcctatcgttatcagtacagcttcggtatcggcaccagcggtaacctgctgtct
gaatccaacgcctttaccattgataacctcaaaaagatcagtggtcgcgataaagaatgc
agcgtggtcaaagcgtttaacggcaagatcttctccgataaaggctcaatcatcaacggt
gcctcgtacaatctaaacggctgcggttttggtttcagcgcttataccgcgaaaatcccc
tacaaatactccgcccagaccatcacgaccagcctggcaaacagcatcagcagcaacgcg
ggttacggcaaactgtaa
DBGET
integrated database retrieval system