Dickeya parazeae: Dd586_3085
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Entry
Dd586_3085 CDS
T01138
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00040
Pentose and glucuronate interconversions
ddc01100
Metabolic pathways
ddc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dd586_3085
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_3085
Enzymes [BR:
ddc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dd586_3085
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACZ77920
UniProt:
D2BU73
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Position
3509267..3510424
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AA seq
385 aa
AA seq
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MNNSRVSSVGKKSLLAAIVTAALMATSAYAAVETDAATTGWATQNGGTTGGAKAAKAVEV
KNISDFKKALNGTDSSPKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSNTTIIGVGSN
GKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYETGDGWNAEWDAAVIDNSTNVWVDHVT
ISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQ
DSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSIL
SEANSFTLSNLKSIDGKNPECSIVKQFNSKVFSDKGSLVNGSSTTNLDTCGLTAYKPTLP
YKYSAQTMTSSLATSINNNAGYGKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaataactctcgtgtgtcttcagtaggaaaaaaaagtttactggctgccattgtcaca
gccgcactgatggctacctctgcctatgcagcagtagaaactgatgccgcaacaaccggt
tgggcaacgcaaaacggcggcactaccggtggcgcgaaggcagcaaaagcagttgaagta
aaaaacattagcgactttaaaaaagccctgaatggaactgactcatcacccaaaatcatc
aaagtaaccggaccaattgatatcagtggtggcaaagcctacaccagctttgacgaccag
aaggcccgcagccagatcagcattccgtccaataccaccattatcggtgttggtagcaat
ggtaaattcaccaacggttcactggttatcaagggcgtgagcaacgttatcctgcgtaac
ctgtatatcgaaaccccggtggatgtcgcgccgcattatgaaaccggtgatggctggaac
gccgagtgggatgcagccgttatcgacaactctaccaacgtctgggttgaccatgtcacc
atcagcgatggtagcttcactgacgataaatacaccaccaaagatggtgaaaaatacgtt
caacacgacggcgcactggatatcaagaaaggctctgactacgtcactatttcttacagc
cgcttcgaactgcacgacaaaaccatcctgatcggccacagcgacagtaacggctctcag
gattccggcaaactgcgcgtcaccttccacaacaacgtgtttgaccgcgtaaccgaacgt
actccacgcgtacgtttcggtagcatccacgcttacaacaacgtatatctgggcgacgtg
aagcacagcgtctatccttacctgtacagcttcggcctgggcaccagcggtagcatcctg
tctgaagctaactccttcacgctctccaacctgaagagcattgatggtaagaacccggaa
tgcagcatcgtgaagcaattcaacagcaaggtcttctccgataaaggctcactggttaat
ggctcgtcaaccactaatctggacacttgtggcctcaccgcttacaaaccgactctgccg
tacaaatattcggctcagactatgaccagcagcctggctaccagcatcaacaacaacgca
ggctacggcaaactgtaa
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