Dickeya parazeae: Dd586_3115
Help
Entry
Dd586_3115 CDS
T01138
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddc03009
]
Dd586_3115
Enzymes [BR:
ddc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dd586_3115
Ribosome biogenesis [BR:
ddc03009
]
Prokaryotic type
rRNA helicases
Dd586_3115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
AAA_22
UBA_7
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACZ77950
UniProt:
D2BUA3
LinkDB
All DBs
Position
3545660..3547012
Genome browser
AA seq
450 aa
AA seq
DB search
MTATNFSEFDLDDSLLDALRDMGFSRPTAIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADQARALAAHTHLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIQDFAERLLNDPAEVEADPSRRERKKILQWYYRADDIQHKTALLS
HLLKQPDVTRSIVFVRKRERVHELVDWLRSAGIESCYLEGEMVQAKRNEAIKRLSEGRVK
VLVATDVAARGLDIQDVSHVFNFDLPRTSDIYLHRIGRTGRAGRKGSAISLVEAHDYLLL
DKIGRYLNEPLKARVIDELRPSTRAPSPKSNGKPSKKVLAKRKEQKEKEKEKQKVKVKVR
HRDSKNIGKRRQPSAKASAEQPKEKPADNT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaccaatttttccgagtttgatcttgatgacagcctgcttgacgccttgcgc
gacatgggcttcagccgtccaaccgccattcaggccgaagctattcctccggcgatggaa
gggcgggatgtactgggctccgcaccaaccggaaccggcaaaaccgcagcctatctgctg
ccggttttacaacacctgctggattttccacgtaaaaaatccggcccgccgcggatcctg
atcctgacaccgacccgggaactggcgatgcaggtggccgatcaggctcgggcgttggcg
gctcatactcatctggacattgcgaccatcaccggtggggtggcttatatgaaccacgct
gaggtgtttagcgaaaatcaggatgtggttgtcgccacgaccggtcgtttattgcaatac
atcaaagaagagaattttgactgtcgtgcagtcgaaaccctgattctggatgaagcagac
cgcatgctggacatggggtttgcgcaggacatcgagcatattgctggtgaaacccgctgg
cgtaagcagaccatgctgttctctgcaacgcttgaaggggatgctattcaggattttgcc
gagcgactgctcaacgaccctgccgaagtggaagccgatccatcgaggcgtgagcgtaaa
aaaattctgcaatggtactaccgtgctgatgacattcagcacaagacagcgctactcagc
cacctgctcaagcagccggacgtcacgcgttccatcgtgtttgtgcgtaaacgtgagcgg
gtgcacgaactggtagactggttgcgatctgctggcatcgaatcctgttacctggaaggg
gaaatggtgcaggccaaacgcaatgaggccatcaaacggttgagcgaaggccgggtgaaa
gtgctggttgctacagatgtcgccgcacgcggtctggatattcaggatgtcagccacgtg
ttcaacttcgatttaccccgcacgtctgacatttatctgcatcgcattggccgtaccgga
cgagcgggccgtaaaggcagtgctatctcgctggtcgaagcgcatgactatctgctgctc
gataaaattggtcgttatctcaacgagccattgaaagcgcgcgtcattgatgaattacgc
ccgagcacccgcgcgccaagccccaaatctaacggtaagccatcgaaaaaagtgctggct
aagcgcaaagaacagaaagaaaaagagaaagaaaagcagaaagtgaaggtcaaggtgcgc
caccgcgatagcaaaaatatcggtaagcgtcgtcagcccagcgccaaagcgtcagcggaa
caaccaaaagaaaaaccagcggataatacctga
DBGET
integrated database retrieval system
