Dickeya parazeae: Dd586_3140
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Entry
Dd586_3140 CDS
T01138
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ddc
Dickeya parazeae
Pathway
ddc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dd586_3140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddc03019
]
Dd586_3140
Enzymes [BR:
ddc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dd586_3140
Messenger RNA biogenesis [BR:
ddc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dd586_3140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
HD
Motif
Other DBs
NCBI-ProteinID:
ACZ77975
UniProt:
D2BUC8
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All DBs
Position
3575972..3577375
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AA seq
467 aa
AA seq
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MFTRVANFCRKVLNRENEPVSVDNPPQTMTVIPRDQHAISRSDISENALKVLYRLSKAGY
EAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIEV
ATFRGHHEQHQEQETKNAAQQGHNGMLLRDNIFGTIEEDAQRRDFTINSLYYSIADFTVR
DYTNGLNDLRQGLIRLIGDPETRYREDPVRMLRAVRFAAKLGMRISAETAEPIPRLASLL
HDIPPARLFEESLKLLQAGHGYPTYQLLCEYQLFQPLFPLISRYFTANGESTMERMIVQV
LKNTDQRIQNDMRVNPAFLFSAMLWYPLVEHAQKLTQESGLAYFEAFALAMNDVLDEQCR
SLAIPKRITSLVRDIWQLQLRLSRRQGKRAFKLMEHPKFRAAYDLLCLRAEIENHQELQR
LAQWWGEFQVAAPPRQQVMLNTLDDGPTPHRRSRRPRKRPIHRDNNR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atctttacccgggtagctaatttttgccgcaaggtactgaatcgtgagaatgagcccgtc
agtgtggacaacccaccacagacaatgaccgtcattcctcgcgaccagcatgccatttca
cgcagtgacattagtgagaatgcgctgaaagtactgtatcgcctgagcaaagcgggctat
gaggcttatctggtaggcggcggtgtccgcgacctgctgttgggcaaaaagcccaaagac
ttcgatattaccaccaacgccaccccggagcaggttcgcaaattgttccgtaattgccga
ttggtgggccgacgctttcgtctggcgcatgtgatgtttggcccggaggtgattgaagtc
gccacattccgcggtcaccatgagcagcatcaggagcaggaaaccaagaatgccgcccag
caaggccataacggtatgctgctgcgtgacaacattttcggcaccattgaagaagacgcc
caacggcgcgacttcaccatcaacagcctctattacagcattgctgacttcaccgtgcgg
gattacaccaacggcctgaacgatctgcgtcaggggctgattcgcctgattggcgacccg
gaaacccgctaccgtgaagacccggtgcgtatgctccgtgcggtacgctttgccgccaaa
ctcggtatgcgcatcagcgctgaaaccgccgagccgattcctcgtctggcctcgttgctg
cacgacatcccaccagcgcggttatttgaagaatcactgaagctattgcaggcgggtcac
ggttaccccacctaccagttactgtgcgaataccagttgttccagcccctgttcccgctc
atcagccgttattttaccgcgaatggtgaaagcacaatggaacggatgatcgtgcaggtc
ttgaagaataccgatcagcgcatccagaacgatatgcgggttaacccggcatttctgttc
tccgccatgttgtggtatccgctggtggagcatgcacagaaactgacgcaggaaagcggg
ctcgcttacttcgaagcctttgcgctagccatgaacgacgttctcgacgaacagtgtcgc
tcactggctattcctaaacggattacttcgcttgtccgcgatatctggcaattgcaattg
cgcctgtcgcgccgtcagggcaaacgtgcgtttaaactgatggagcatccgaaattccgg
gcagcgtatgacttgctgtgtttgcgtgcggaaattgaaaaccatcaggaattacagcgt
ctggcacagtggtggggcgagtttcaggtagcggcaccgccgcgccagcaagtgatgctc
aatacacttgatgacggcccgacaccgcatcgccgttctcgtcgtccgcgtaaacgtcca
attcaccgggataataaccgatga
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