Dickeya parazeae: Dd586_3164
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Entry
Dd586_3164 CDS
T01138
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddc03009
]
Dd586_3164
Enzymes [BR:
ddc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Dd586_3164
Ribosome biogenesis [BR:
ddc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dd586_3164
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
S4_2
LPD14
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
ACZ77999
UniProt:
D2BUF2
LinkDB
All DBs
Position
complement(3604350..3605327)
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AA seq
325 aa
AA seq
DB search
MSQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGNMVDRPKEKVL
GGESVAIDALIEEDARWEAQPISLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL
HHYPEIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMT
AGGTVDEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
AHINHPLVGDPLYGGRPRLPKGASDEFIETLRNFDRQALHATMLRLYHPISGIQMEWHAP
LPQDMVDLIAALKADTEAFKDQLDW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacaagtacaactcaccgcgacggtggccgaatctcaacttggacaacgttta
gatcaggctttggccgaattgttccctgattattcgcgttctcgcataaaaacatggatt
ttggaacagcgggtacagattaacggcaatatggtcgacagaccaaaagagaaagtgctt
ggtggagagtccgttgccattgatgcccttattgaggaagacgcgcgctgggaagcccag
ccgatttcgctggatattgtgtacgaagacgacgatatcctggtgattaataaacctcgc
gatctggtcgtacaccctggtgccggcaacccggatggtacggtgctgaatgcgttgtta
catcactatccagagattgcggatgtgccgcgtgctggtattgtccaccgattagacaaa
gataccaccggactgatggtagtcgcgaagacggtacccgcacagaccagattggtcgaa
tcgctgcaggcgcgtgaaatcacccgtgaatacgaagcagtagccatcggtacgatgacg
gcaggcggcactgtcgatgagccaatcgcgcgccattcgaccaagcgcacccatatggcg
gtgcatccgatggggaaaccagctgtcacgcactaccgtattatggagcatttccgcgcg
catacccgcttgcgtttgcggttggaaacgggaagaacccaccagattcgtgttcacatg
gcgcacatcaatcaccccttggtgggagacccgttgtatggcggtcgtccgcgtctgcct
aaaggggcgtccgatgagtttatcgagacgctgcgcaattttgatcgccaggcgctgcat
gccactatgttgcggctttatcatcctatcagcggcattcagatggagtggcatgcgcct
ttgccgcaggatatggtagacctgatcgccgcactgaaagcggataccgaagcgttcaaa
gatcaacttgactggtga
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