Dickeya parazeae: Dd586_3289
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Entry
Dd586_3289 CDS
T01138
Name
(GenBank) tRNA/rRNA methyltransferase (SpoU)
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddc03009
]
Dd586_3289
03016 Transfer RNA biogenesis [BR:
ddc03016
]
Dd586_3289
Ribosome biogenesis [BR:
ddc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dd586_3289
Transfer RNA biogenesis [BR:
ddc03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Dd586_3289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ACZ78122
UniProt:
D2BV54
LinkDB
All DBs
Position
complement(3738782..3739924)
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AA seq
380 aa
AA seq
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MSDTLSGKGGKVRVMYVRSEDGDEKSSKPKRTSDKRRGDGDSHRSDSNRGDSNRGSRKGR
DGAPRGGRDRDNKDNKDSAGRGGKWRGESAGRERPVRGESPEYADSPWKTVSRAPEETPD
HGGISGKSQVDPEQIRRQRAEETRVYGENACQALFLSRPEAIVRGWFLQEVTPRFREALR
WMAANRKAYHVVEDEELARASGTEHHGGVCFLIKKRRGLDVTAYLREAGETDCVLALEDV
GNPHNLGGIMRSCAHFGVKGVLVNDASQLESGAAVRTAEGGAEHVKAISAEGLVDALAQF
RAAGYTIVTTSSHKGTTLSQVSLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIDGTGNVES
LNISVATGILLAEWWRQHHG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacattgagtggaaagggcggcaaagtccgtgtcatgtacgtccgcagcgag
gacggggacgagaaaagcagtaagccaaaacgaacatcggataagcgtcgtggtgacggg
gatagccatcgtagtgatagcaaccgtggcgacagcaaccgtggcagccgtaaagggcgt
gatggtgcgccgcgtggcggacgcgatcgggacaataaagataataaagacagcgccggg
cgtggcggtaagtggcgcggtgagtcggctgggcgtgagcgtccggttcgcggtgaatcg
ccggaatatgctgattctccctggaaaacggtatcacgtgcgccagaagagacaccggat
cacggcggaattagcggtaaaagccaggtcgacccggagcagattcgccgccagcgtgcc
gaggaaacgcgggtttacggagaaaatgcctgtcaggctctgtttttgagccgtccggaa
gccattgtgcgtggctggtttttgcaggaagtcacaccgcgttttcgtgaggcactgcgt
tggatggcggctaaccgcaaggcttaccacgtagtggaggacgaagaacttgctcgtgca
tccggtactgaacatcacggcggtgtgtgttttctgatcaagaaacgccgtggtctggat
gtcactgcctacctgcgtgaagccggggaaactgactgtgtgctggcgctggaagatgtg
ggtaatccacataatctgggcggaatcatgcgcagctgcgcacattttggtgtgaaaggt
gtgctggtcaatgatgcatcgcagctggaatccggtgccgcagtgcgtacggctgaaggt
ggcgccgagcatgtgaaagccatcagcgctgaaggtctggttgatgcgctggcgcagttc
cgtgctgcgggttacaccatcgtgacgacgtccagccataagggcaccaccttgtcgcaa
gtctcgctgcccgcgaagacggtgattgtgttgggtcaggaaggcgatggcttgtcagac
agtgcctggcagcagggcgatgtcaaagtatcgattgatggtaccggcaatgtagaaagc
ctgaatatctcggttgcgaccgggatcctgctggcggagtggtggcggcagcatcacggt
taa
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