Dickeya parazeae: Dd586_3305
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Entry
Dd586_3305 CDS
T01138
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddc03016
]
Dd586_3305
Enzymes [BR:
ddc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Dd586_3305
Transfer RNA biogenesis [BR:
ddc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dd586_3305
Prokaryotic type
Dd586_3305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
ACZ78138
UniProt:
D2BV70
LinkDB
All DBs
Position
complement(3763135..3764187)
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AA seq
350 aa
AA seq
DB search
MVMACESLSWLHGEPVATGKLKASPDDFFVAEDLGFTADGDGEHVLVRLRKRECNTIFVA
EALARFAGIPARSVSYAGLKDRHAVTEQWFCLHLPGKESPEWSTFALDGCEILEAHRHRR
KLRIGALRGNAFRLVLREISDRAEVETRLQQVAAGGVPNYFGSQRFGRDGNNLDQARRWA
NDEIRVKDRSKRSFYLSAVRSELFNQIASARLATYGPTQVLVGDALQLTGRGSWFVVKPE
ELDDAQSRVNAGDVQITAALPGQGDPGVQALALSFEQQCLQEHTQLLSLLTRERVESARR
AIMLYPQEMRWLWQDDATLELHFWLPAGCFATSVVRELLLPVQQEQQENR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggcttgcgaatcactgtcttggttgcatggtgaacctgtcgcaacagggaaa
ctcaaggcgtcgccggatgatttctttgttgccgaggatttggggtttaccgcagacggt
gacggcgaacatgtgctggtacgtcttcgtaaacgagagtgtaataccatttttgtagcg
gaagcactggccaggtttgcaggtatcccggcgcgttctgtcagctatgccggactaaaa
gatcgtcacgcggtaactgagcagtggttctgtcttcatttgccgggcaaagagtccccg
gagtggtcgacgtttgcgctcgatgggtgtgaaattcttgaagcacatcgccatcgccgt
aaactgcgtattggtgcgctacgtggcaatgcatttcgactggtgttgcgtgagatcagt
gaccgtgccgaggtcgaaacccgtttgcaacaggtcgcagccgggggcgtacctaattac
tttggcagtcagcgttttggtcgcgatggtaataatctggatcaggcccgtcgttgggcg
aatgacgagattcgggttaaggatcgcagcaaacggagtttctacctctcggccgttcgc
agtgaattatttaatcagatagccagcgcgcggctggcgacatatggcccaacacaagta
ttggtgggtgatgcactgcaactgaccggtcgcggtagctggtttgtggtgaagccggag
gagttggacgacgcgcagtcacgtgtgaatgctggcgacgtacaaattaccgcggcctta
ccgggacaaggcgaccctggcgtgcaagcgctggcgctgtcgtttgagcagcaatgtttg
caggagcacactcagctcttatcattgttgacgcgcgagcgggtggagagtgctcgtcgc
gctatcatgttgtatccgcaagagatgcgctggttgtggcaagatgatgccacgctggag
ttacacttttggctgcctgcggggtgctttgccaccagcgtggtgcgggaactgctgctt
cctgtgcaacaggaacaacaggaaaataggtaa
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