Dickeya parazeae: Dd586_3329
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Entry
Dd586_3329 CDS
T01138
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddc03009
]
Dd586_3329
Enzymes [BR:
ddc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Dd586_3329
Ribosome biogenesis [BR:
ddc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dd586_3329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
Methyltransf_25
MTS
RrnaAD
Methyltransf_11
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Cons_hypoth95
Ubie_methyltran
Methyltransf_15
Methyltrans_SAM
Methyltransf_23
Methyltransf_32
Methyltransf_4
FtsJ
Methyltransf_12
Ribosomal_L22
DOT1
CMAS
Motif
Other DBs
NCBI-ProteinID:
ACZ78162
UniProt:
D2BVM8
LinkDB
All DBs
Position
complement(3793374..3794708)
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AA seq
444 aa
AA seq
DB search
MAQFYSPNRRVTTRQTLTVTVDDLDPFGQGVARHQGKTVFIPGVLPGEQAEVQITQDKRQ
FAHAKLRRLLTTSEDRVTPRCPHFSVCGGCQQQHASQPLQHRSKSAALKHLMQRETGDTV
PEPEVIGAAAYGYRRRARLALYYQAKTRQLQMGYRQAGSHDLVDIRACPILHPALEALLV
PLRDCLGQLRAQRRLGHVELVLAEQGPLVVLRHLEPLCDADRHALTAFAQACGASLFAAP
QADTLECLHGDMPSYRIAGLSLAFSPRDFIQVNDDINQRMVAQALTWLELQPQDRVLDLF
CGMGNFTLPMAQHAGRVVGVEGVAALVEKGQENAQRNGLTQVTFYHHNLEEDVTRQPWAS
MGFDKVLLDPARAGAPGVMPQIVKLAPRRVVYISCNPTTLARDSKVLMAAGYRLARLTML
DMFPHTGHLESMALFLLGSEGSVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccaaaccggcgcgtgacgacccggcaaacccttaccgtgacg
gtggatgatctcgatccattcggacagggagtcgcccgtcatcagggaaaaacggtgttc
attcccggcgtcttaccgggagagcaagctgaggtgcagataacgcaagataaacgccag
tttgcccacgctaaattacgacgcttgctgaccaccagcgaagatcgcgtgacgccgcgt
tgcccacatttttccgtgtgcggcggttgccagcagcagcatgccagccagccattacag
catcgcagtaaatcggccgcactgaaacacctgatgcaacgggaaaccggtgacaccgtg
ccggagccggaggttatcggtgcagcggcctatggctaccgccgccgcgcacgccttgca
ttatactatcaggcgaaaacacgccagttgcagatgggctatcggcaggcggggtcgcac
gacctggtggatatccgcgcctgtccgattttgcatccggcgctggaagccttactggtg
ccgttacgcgactgtctgggccaattgcgagcacagcggcggctcgggcatgtggagctg
gtcttggcggagcaagggccgctggtcgttttgcgtcatctggagccgttgtgtgacgct
gaccggcacgcgttgacagcgtttgcgcaggcttgcggtgcgtcgctgtttgctgcgccg
caagcggacacgctggagtgtctgcacggcgacatgccgtcttatcgtatcgccgggtta
tcgctggcgttcagtccgcgtgattttattcaggtgaatgatgatattaaccaacgtatg
gtggcgcaggcgttaacgtggctggaactgcaaccgcaggaccgcgtgctcgacctgttt
tgcggcatgggcaatttcacgttaccgatggcgcagcacgccggtcgggtggtcggtgtt
gagggtgtcgcggcgctggtagagaaaggtcaggaaaatgcccagcgtaatgggctgacc
caagtcacattttatcatcataatctggaagaagacgttacccgacaaccgtgggcgtca
atggggtttgataaagtattgcttgatccggctcgcgccggtgcgccgggtgtgatgccg
cagattgtgaaactggctccccggcgggtggtgtatatatcctgtaaccccaccacgctg
gcgagagatagcaaggtactgatggcagccggttatcgtttggcccggttgaccatgttg
gatatgtttccacataccggacatcttgagtcaatggcactgtttttgcttggttccgaa
ggttcggtaaagtag
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