Dickeya parazeae: Dd586_3389
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Entry
Dd586_3389 CDS
T01138
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
ddc
Dickeya parazeae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
PAS_8
PAS_3
PAS_7
PAS_13
Motif
Other DBs
NCBI-ProteinID:
ACZ78222
UniProt:
D2BVT8
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Position
3867598..3869667
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AA seq
689 aa
AA seq
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MTGSAWNSESLFQGILDRCPVGIAVINYDGKYVTVNPAYSAIYGYTQEEMVNHPFTMVFP
ESTRPSVLARHQSFLDEGGKLGGEWTVVRHDGAVLTVWSESVPFAQHGQKADRLVYVLDI
TERQKAREQMKIAATVYESTQEAIIVIDTNRNIISINPAFTRLTGYSEADIVGKPSNIFQ
SDRHDIAFYNAIWRTVNEDGLWVGEMWDRKKDGSDYLRELTINMVKDAAGTPINYVGVFS
DITQRKKQEELIWRQANYDAVTALPNRHRFQDKLERAVERAKQTGRPMALMLIDLDHFKS
VNDSLGHRAGDALLFAVSTRITDCIQNADTIARIGGDEFAIILSDLLRTDDCGRLANTLL
QRLAKPFNIDGENMLVSASIGIAFYPNDSDTLEELFKHADQAMYSAKSAGRNGFHYFTPA
LHQAARARLRLTNDLRQALESAQFEVYYQPIIELATNRITKAEALVRWHHPERGLVSPAE
FIPLAEDTGLIVPLGDWVAQQAIIQLAQWRNTLDPHFQIAINQSPIQLRSKDFTEMTWVQ
ELARYGLDGNAVIIEITEGLLLNAELRVNNNLHLLRDAGIQIAIDDFGTGYSSLAYLRKF
NIDCLKIDRSFIEDLDGIGLELCVAIIAMAHSLGLNVVAEGVETQHQCDILTRLGCDYAQ
GFLFSRPVPAPELTTMLQAATDTTETKSA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaccggttctgcatggaattcagaaagtttgtttcagggcatcctcgaccgctgcccg
gtgggcattgccgttatcaattacgacggaaagtatgtcaccgttaatcctgcctatagc
gctatttatggttacacccaggaagagatggttaatcatccctttactatggtttttcct
gagtctacccggccatccgtcctggcccgtcatcagtcgtttctcgatgaaggcggcaaa
ctgggaggggaatggacggtcgtccgtcatgacggtgcggtcctgacagtctggtcagaa
tccgtccccttcgcgcagcacgggcaaaaagccgaccgactggtgtacgtcctcgatatt
accgaacgccaaaaagcacgtgagcagatgaagattgccgctaccgtctacgaaagtacc
caggaagccatcatcgtcatcgataccaaccgaaacattatctccatcaaccccgccttt
acccgcctgaccgggtatagcgaagctgacatcgtgggaaaaccgtcgaacatattccag
tccgatcgtcatgatatcgctttctataatgccatctggcgcacggtgaatgaggacggg
ctgtgggtcggtgaaatgtgggatcgcaagaaagacggcagcgactatctccgggaactg
actattaatatggtcaaagacgcggcaggcacccccatcaactatgttggcgtgttctcc
gatattacccagcgcaaaaaacaagaagaattaatctggcgacaagccaactatgacgcg
gtcactgcactgccaaaccgacacagatttcaggataaacttgaacgtgcggttgaacgc
gcaaagcagaccggccgcccaatggcgctgatgcttatagacctggaccatttcaaatcg
gttaatgacagcctggggcaccgcgcaggcgatgcgctgctgtttgcggtgtcgacccgt
attaccgactgtattcagaatgccgatactattgcccgaatcggtggcgacgaatttgcc
attatcctgtctgacctgctacgaaccgatgactgcggacgtctggccaacacattgctg
cagcgtttggcaaaaccgttcaatatcgacggggaaaacatgctggtttccgccagtatc
ggtattgccttttaccctaacgacagtgacacattggaagaactgttcaaacatgccgac
caggcgatgtattccgccaagagcgcggggcgcaacggcttccattatttcacgcctgcc
ctgcatcaggctgcgcgcgcccgtttacgcctgactaacgatctgcgccaggcgcttgaa
tccgctcagtttgaggtttactaccagccgattatcgaactggctaccaaccggataacc
aaggctgaagcgctggtacgctggcatcatcccgaacggggtctggtcagtccggctgag
tttatcccgctggcggaagataccggccttatcgttcccctcggcgactgggtcgcgcag
caggccattatccagttagcacaatggcgcaacacgctcgacccgcactttcagatagcc
atcaaccagtcccccattcaactacgcagcaaagatttcactgaaatgacctgggtgcag
gaactggcgcgatacgggctggacggcaacgccgtgatcatcgaaatcaccgaggggcta
ctgttgaatgcggaactgcgggtgaacaacaatctgcatctgctccgtgatgccggaata
caaattgccattgatgatttcggcaccgggtattcatcactggcctacctcaggaaattc
aacattgattgcctgaagattgatcgctcctttattgaggatctcgatggcatcgggctt
gaactgtgcgtggcgattatcgccatggctcacagccttggcctcaatgtggtagccgaa
ggggttgaaacgcagcaccagtgcgacattcttacccgacttgggtgcgactatgcacag
ggctttttgttctcacgcccggtcccggccccggagctaacgacgatgctgcaagccgcc
accgatacgacagaaacaaaatcggcgtaa
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